Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq36 183 4e-41 seq9 150 2e-31 >seq36 Length=569963 Score = 183 bits (202), Expect = 4e-41 Identities = 1076/1696 (63%), Gaps = 61/1696 (4%) Strand=Plus/Plus Query 111621 ATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACA 111680 ||| ||||||| || || | ||||| || || || ||||| || || | | || ||| Sbjct 130356 ATGATCATGCGTGTTGCCGTTGGTATTCACGGTGATGATATCGAAAGTGCTATCGAAACA 130415 Query 111681 TACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGG 111739 ||| || |||||| ||| || | || || | ||||| ||||| || || Sbjct 130416 TACAACTTGATGTCAAACAAGTACTTT-ACACATGCTTCCCCAACACTCTTTTCTGCGGG 130474 Query 111740 TACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAA 111799 ||| ||| | | ||| | || ||| ||||| || | | |||||||| || | Sbjct 130475 TACTCCACAAGCACAACTTTCATCTTGCTTCCTCATCGACATGAAGGAGGACAGTATTGA 130534 Query 111800 TGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGG 111859 ||| || |||| ||| | | |||||| ||||||||| || |||||||| || Sbjct 130535 TGGTATCTACGATACTTTGAAGATTTGTGCCATGATCTCAAAGAATGCCGGTGGTATTGG 130594 Query 111860 GATGCACATCCATGATGTCAGAGCCAACAAGT-CTCGTATTAGAGGTACAAATGGTCAAT 111918 | |||| || || | || | | || | || ||||| || || | | Sbjct 130595 TCTCAACATTCACAGAATCCGTGCTA-CTGGTGCATACATCGCCGGTACCAACGGAAATT 130653 Query 111919 CAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAG 111978 | |||||||| |||| |||||||| || || ||| ||| || | ||||| | |||| Sbjct 130654 CCAATGGTATTGTTCCCATGCTTCGAGTTTTCAACAACACTGCCAGATATGTTGATCAAG 130713 Query 111979 CTGGG------CGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATA 112032 ||| |||| || | | || || || |||||||||||||| || ||| Sbjct 130714 GTGGTAACAAACGTCCT---GGTGCGTTTGCTGTTTACCTTGAGCCATGGCATGCCGATG 130770 Query 112033 TCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC-CGCGAT 112091 | | ||||| ||||| | || ||||| ||| | || || | | |||| |||||| Sbjct 130771 TTTTCGAGTTTCTTGATCTACGCAAAAACCACGGTAAGGAAGAAGTTC-GTGCGCGCGAT 130829 Query 112092 CTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAAT 112151 ||||||| || | |||||||| ||| | ||||||||| | ||||| ||| ||| | Sbjct 130830 CTCTTCTATGCCTTGTGGATTCCTGATTTGTTCATGAAGCGTGTTGAAAAGAATGGAGAA 130889 Query 112152 TGGTCTCTCTTTTG-TCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTT 112210 ||| |||| | || ||| || || || ||| | | |||| || |||||||| Sbjct 130890 TGGACTCTTATGTGCCCCAATGAATGC-CCTGGTTTGGCAGATGTTTATGGCGAGGAGTT 130948 Query 112211 TGAAGCCCTCTACACAAAGTACG---AGGAAGAAA---GTCGGGCGACTGCGACGGTGCC 112264 || || |||||| | || | ||| || || |||| |||| | | Sbjct 130949 CGAGGCTCTCTACGAGAGTTATGAAAAGGCAGGAAAGGGTCGCAAGACTATCAAG----- 131003 Query 112265 AGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATAT 112324 ||| | | ||| | ||||||| || ||||||||||||| || | || | || Sbjct 131004 -GCTCAAAAGCTTTGGTACTCTATTCTTGAGGCTCAAACCGAGACCGGAAATCCTTTCAT 131062 Query 112325 GCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAG 112384 |||||||||||| || || ||| | ||||| || |||||||| | ||| || || Sbjct 131063 GCTTTACAAAGATGCATGCAACAAGAAGAGCAACCAAAAGAACCTTGGTACTATTCGCAG 131122 Query 112385 TTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAA 112444 |||||| | || ||||| ||| | || | | | ||||||| ||| ||||| Sbjct 131123 CTCCAACTTGTGCACAGAGATCGTTGAGTACTCTGCACCAGATGAGGTTGCTTGCTGTAA 131182 Query 112445 CCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG-ACATTTGATTATG 112503 | | || ||||| ||||| |||| | | | | || | | || | ||||| Sbjct 131183 CTTGGCTTCAATTGCTCT-ACCAACTTTCGTCAACATGAATGAGGGAACTTATGATTTCC 131241 Query 112504 AAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAA 112563 |||| || ||||| || || |||| | |||| | |||| | ||||||| | Sbjct 131242 AAAAGCTTCACGAGGTCGTCCAAGTTGTCGTTAGAAACTTGAACAAGATCATTGATATCA 131301 Query 112564 ATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCG 112623 | | ||| || || | || | || ||| | | ||||| || || | | | | Sbjct 131302 ACTATTATCCAGTACAAGAAGCCAGAAAGAGCAATTTCCGTCACCGACCTATCGCTGTTG 131361 Query 112624 GTGTCCAAGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTTGATTCCGACG 112680 |||| |||||||| || |||| ||| | |||| ||| | |||||||||| | Sbjct 131362 GTGTTCAAGGTCTTGCTGATGCTTTCTTGGCTCTTCGTCTTC---CATTTGATTCGCCAG 131418 Query 112681 AAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGA-GGCG 112739 |||| ||| | |||| | || || ||||| || || ||||| || ||||| | Sbjct 131419 AAGCCAAGCACCTCAACATCCAGATTTTCGAGACCATTTACCACGCTGC-CTTGACCTCA 131477 Query 112740 AGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA 112799 | ||| | ||| ||| ||| || || ||||||| | | || || |||| || Sbjct 131478 TCTGTCGAGATTGCAAAGGAACTTGGCCCGTACGAAACCTATCAAGGCTCCCCAGTCTC- 131536 Query 112800 CAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTC-----ACTACGAC 112853 |||||| | || |||| ||| |||||| || | ||| |||| | || Sbjct 131537 CAAGGGTGAACTCCAATATGACATGTGG---GGCGTCACC--CCTTCTGATTTGTGGGAT 131591 Query 112854 TGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCA 112913 |||||| || | ||| || ||||||| | | || |||| ||| ||| | | ||| Sbjct 131592 TGGGACTCTTTGAAGCAATCCATCAAGCAACACGGAATTCGCAACTCCCTTCTCGTTGCA 131651 Query 112914 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTAC 112973 || ||||| || || || |||||||| | ||| || ||||| || ||||| || Sbjct 131652 CCTATGCCTACTGCTAGTACTTCACAAATCCTCGGTTTCAACGAATGTTTCGAACCATAT 131711 Query 112974 ACGACGAACATCTATCTGA-GAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCA 113032 || | |||||||| || | | | || || ||||| || |||| ||| || Sbjct 131712 ACTTCAAACATCTA-CTCACGTCGTGTTCTAGCTGGAGAATTCCAAGTTGTTAAC--CCA 131768 Query 113033 T--CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATG 113090 | ||| | | ||||| || || ||||||||||| | | |||||| | | || Sbjct 131769 TGGCTCCTCAAAGACCTTGTGGATATGGGTCTCTGGTCTGACAACATGAAGAACCGTATC 131828 Query 113091 GTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTG 113150 | | ||||| || |||||||| || | ||||||| ||| || || | Sbjct 131829 ATTGCCGATGGTGGATCGATTCAAAACATCCCCAACATTCCAGCTGACATCAAAGCCCTT 131888 Query 113151 TACCGCACAGTTTGGGAAA--TCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTG 113208 ||| || |||||||||| || | ||| | | || | ||||| || ||||||| Sbjct 131889 TACAAGACTGTTTGGGAAATTTCTCAACGAACAA--TTGTTCAAATGGCTGCTGATCGTG 131946 Query 113209 GTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCA 113268 || || || |||||| |||| ||||| | |||| | ||| || ||| || Sbjct 131947 GTGCATTTATCGATCAATCTCAATCAATGAACATTCACATGAAGGATCCTACAATGGGCA 132006 Query 113269 AGCTCTCTTCTATGCA 113284 || || | |||||||| Sbjct 132007 AGATCACATCTATGCA 132022 >seq9 Length=1448665 Score = 150 bits (166), Expect = 2e-31 Identities = 162/212 (76%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 102168 |||||| || ||| | ||||| || || |||||| | || ||| || | |||| | | Sbjct 448506 AGTTCCTTGCATTAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGACAAGAACTC 448565 Query 102169 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 102228 | |||||||| | || ||| | ||||| || |||||||||||||||||||||||| | Sbjct 448566 -TACCTTTGCTCAACGTCTCGTTGCATTCGCCGCTGTTGAGGGTATCTTCTTCTCTGGAT 448624 Query 102229 CCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 102288 | ||| | || | |||||||||||||| ||||||||| | || ||| |||||||| Sbjct 448625 CTTTCGCATCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGGCTGGACTCACCTTCTCCA 448684 Query 102289 ACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||| || ||||| |||||||| || |||||| Sbjct 448685 ACGAACTCATCTCCCGTGACGAAGGTCTCCAC 448716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620739948067520