Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq9 136 5e-27 >seq9 Length=1448665 Score = 136 bits (150), Expect = 5e-27 Identities = 186/260 (72%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 153768 CAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 153827 ||| | ||||| |||| | || ||||| ||||| |||||||| ||||| || Sbjct 486104 CAACGTTTTGGAGTTCCATTTGGTTATGGTGGTCCACATGCTGCTTTCTTCGCTGTTGGC 486045 Query 153828 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGT 153887 ||||||||||||||||| || || || | | | ||| ||| || || ||| Sbjct 486044 GACAAGTATAAGAGAAAAATTCCAGGACGTCTCATTGGTGTATCAAAGGACAGGCTAGGG 485985 Query 153888 AATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCA 153947 |||| ||| ||||| || ||||| ||||||||||||||||| | ||||| || || Sbjct 485984 GATAAGGCAATGAGATTGGCTCTACAAACTAGAGAGCAGCATATTCGCAGAGAAAAGGCT 485925 Query 153948 ACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCA 154007 || ||||| | ||||| ||||| ||| || |||| || ||| || |||||||||| Sbjct 485924 ACTAGTAATGTGTGCACGGCTCAAGCATTGTTGGCCAACATGAGTGCGTTCTATGCAGTT 485865 Query 154008 TATCATGGTGCAGATGGACT 154027 || ||||| |||| ||||| Sbjct 485864 TACCATGGGCCAGAAGGACT 485845 Score = 132 bits (146), Expect = 6e-26 Identities = 172/235 (73%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 154871 TATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTA-GACAGATAT 154929 ||| ||||| ||||||||| |||| ||||||||||||| | | |||| | | | || Sbjct 484932 TATCATGATCACATACCCAAGTACATTTGGTGTATTTGAACCAGAAATTAAGGCCGC-AT 484874 Query 154930 GTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCAC 154989 || | || |||||| | |||||||||| ||||| | ||||| || || | ||||| | Sbjct 484873 GTGATATTGTTCATCAACATGGTGGTCAAGTATACATGGATGGTGCCAACATGAATGCTC 484814 Query 154990 AGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATA 155049 | | ||| | ||| ||||| |||||| |||||||| || || ||| | || | Sbjct 484813 AAATTGGATTGTGTTCACCTGGTGAGATTGGTGCCGATGTATGCCACCTTAACCTTCACA 484754 Query 155050 AAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 | |||||||||||||| || || ||||| || || || || ||||| || ||||| Sbjct 484753 AGACATTCTGTATTCCTCACGGTGGTGGTGGACCAGGTGTTGGTCCAATTGGTGT 484699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579210512109440