Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq9 147 3e-30 >seq9 Length=1448665 Score = 147 bits (162), Expect = 3e-30 Identities = 272/392 (69%), Gaps = 9/392 (2%) Strand=Plus/Minus Query 159394 TGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATG 159453 || ||||| || | || || ||||| || || ||||||||||| | |||||||| ||| Sbjct 485087 TGCTTGATTCCTGTTTCTGCTCATGGTACCAACCCTGCATCAGCTGCTATGGCAGGTATG 485028 Query 159454 AAAGTTGTAGGTGTCAAGTGTGA--TGATGA-TGGCAACATAGACATCAAAGATCTAGAG 159510 ||||| ||| || ||||| | | | |||||| | || || ||||| | Sbjct 485027 CGTGTTGTTACTGTGAAATGTGACATCAAGTCTGGCAATCTTGATATGGCTGATCTCAGG 484968 Query 159511 AAGAAAGCAATCATGAATACATTT--GAACTGTCATGTATTATGATTACATATCCATCTA 159568 ||||| | | |||| | ||||| | ||| ||||| ||||| ||| || Sbjct 484967 GAGAAATG--TGAAAAATATAGCGAGGAACTTGGAGCTATCATGATCACATACCCAAGTA 484910 Query 159569 CACATGGTGTATTTGAAACAAACATCA-GACAGATATGTAAGATTGTTCATGAGAATGGT 159627 || ||||||||||||| || | || | | | | |||| | ||||||||| | ||||| Sbjct 484909 CATTTGGTGTATTTGAACCAGAAATTAAGGCCGC-ATGTGATATTGTTCATCAACATGGT 484851 Query 159628 GGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGT 159687 ||||| ||||| | |||||||| || | ||||| || | || | ||| || Sbjct 484850 GGTCAAGTATACATGGATGGTGCCAACATGAATGCTCAAATTGGATTGTGTTCACCTGGT 484791 Query 159688 GACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGA 159747 || |||||| |||||||| || || ||| | || ||||||||||||||||| || || Sbjct 484790 GAGATTGGTGCCGATGTATGCCACCTTAACCTTCACAAGACATTCTGTATTCCTCACGGT 484731 Query 159748 GGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 ||||| || || || || ||||| |||||||| Sbjct 484730 GGTGGTGGACCAGGTGTTGGTCCAATTGGTGT 484699 Score = 138 bits (152), Expect = 1e-27 Identities = 199/281 (71%), Gaps = 0/281 (0%) Strand=Plus/Minus Query 158422 GACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCAT 158481 ||||| ||| | || | | ||| | ||||| |||| | || || || ||||| ||| Sbjct 486125 GACATCGCTTTTGGAAATGCTCAACGTTTTGGAGTTCCATTTGGTTATGGTGGTCCACAT 486066 Query 158482 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 158541 ||||| ||||| || ||||||||||||||||| || || || | | | ||| Sbjct 486065 GCTGCTTTCTTCGCTGTTGGCGACAAGTATAAGAGAAAAATTCCAGGACGTCTCATTGGT 486006 Query 158542 CAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 158601 ||| || || ||| |||| ||| ||||| || ||||| |||||||||||| Sbjct 486005 GTATCAAAGGACAGGCTAGGGGATAAGGCAATGAGATTGGCTCTACAAACTAGAGAGCAG 485946 Query 158602 CATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAAT 158661 ||||| | ||||| || || || ||||| | ||||| || |||||| || |||| || Sbjct 485945 CATATTCGCAGAGAAAAGGCTACTAGTAATGTGTGCACGGCTCAAGCATTGTTGGCCAAC 485886 Query 158662 ATGTCTGGGTTCTATGCAGCATATCATGGTGCAGATGGACT 158702 ||| || ||||||||||| || ||||| |||| ||||| Sbjct 485885 ATGAGTGCGTTCTATGCAGTTTACCATGGGCCAGAAGGACT 485845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588048877197760