Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq4 113 3e-20 seq1 84.2 1e-11 >seq4 Length=2737121 Score = 113 bits (124), Expect = 3e-20 Identities = 157/216 (73%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829 || || ||||||| ||| || || || ||||| ||||| |||||| | || |||| Sbjct 1682909 AACACTAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCC 1682968 Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 || || || |||||||| || || | ||| || ||||| | || | ||||||||||| Sbjct 1682969 TCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTCT 1683028 Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTAT 34945 ||||| |||||| || | ||||| | ||| | |||||| |||| ||| || Sbjct 1683029 TGGATCTTGGCTTTGAC--AT--TGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGAT 1683084 Query 34946 GGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||| |||||||| ||||| || ||||||||||| Sbjct 1683085 AGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 1683120 >seq1 Length=2965994 Score = 84.2 bits (92), Expect = 1e-11 Identities = 149/215 (69%), Gaps = 8/215 (4%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 |||||| || | || |||||| || ||||| ||||| ||||| | || |||| || Sbjct 1569890 AACCAAATGTAAAGTCGATTCTTTTTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTC 1569949 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || || || || ||||| || || ||||| || || | || | ||||| ||||| Sbjct 1569950 AAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCAGGGGGAATGCCCTCTTTGTCTTG 1570009 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGG 34947 |||||| || ||| | ||||| | ||| | |||||| || | || || | Sbjct 1570010 AATCTTAGCCTTCACGT----TGTCGATGGTGTCCGATGACTCAACCTCTAAAGTGATCG 1570065 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | ||||| ||||||||||| || ||||| |||||| Sbjct 1570066 TCTTTCCGGTGAGAGTCTTAACGAAGATTTGCATA 1570100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632349754848