Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq36 187 3e-42 >seq36 Length=569963 Score = 187 bits (206), Expect = 3e-42 Identities = 543/827 (66%), Gaps = 18/827 (2%) Strand=Plus/Minus Query 47991 TTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATG 48050 ||||| ||||| || ||||||||||| ||||| |||| || || | |||| |||| Sbjct 131086 TTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCGGTCTCGGTTTGAGCCTCAAGA 131027 Query 48051 ATAGATTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATG----TTC 48106 ||||| | ||||| | |||||| ||| ||| || | || || ||| Sbjct 131026 ATAGAGTACCAAAGCTTTTGAGCCTTGATAG----TCTTGCGACCCTTTCCTGCCTTTTC 130971 Query 48107 GTA--TTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACAT 48164 || | | ||| | | | ||| || || || ||||| |||| | || ||||| ||| Sbjct 130970 ATAACTCTCGTAGAGAGC--CTCGAACTCCTCGCCATAAACATCTGCCAAACCAGGGCAT 130913 Query 48165 TCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCT 48224 ||||| || ||||| | | ||| || ||| |||| || | |||| || | ||| Sbjct 130912 TCATTGGGGCACATAAGAGTCCATTCTCCATTCTTTTCAACACGCTTCATGAACAAATCA 130853 Query 48225 GGTATCCAAAGAGCTATA-AATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCT 48283 || ||||| | || ||| || | ||| | | | | |||||| || || || | Sbjct 130852 GGAATCCACAAGGC-ATAGAAGAGATCGCGCGCACGAACTTCTTCCTTACCGTGGTTTTT 130794 Query 48284 TTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTAC 48343 || |||||||| || | | ||| ||||||||||| || | || | || | | Sbjct 130793 GCGTAGATCAAGAAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAGCAAACGC 130734 Query 48344 ACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAA 48403 ||| || ||||| ||||| |||||||| | |||||||||||| ||||| |||||| | Sbjct 130733 ACCAGGACGTTTGTTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAAACTCGAAG 130674 Query 48404 CATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCT 48463 ||| || ||||||||||| || | || ||||| || | || || ||| |||| | Sbjct 130673 CATGGGAACAATACCATTGGAATTTCCGTTGGTACCGGCGATGTATGCACCAGTAGCACG 130614 Query 48464 TATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTT 48523 || | ||| | ||| |||||||| || | || || || | ||||| || Sbjct 130613 GATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCACAAATCTT 130554 Query 48524 AAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGA 48583 | ||||| || || || || ||||| || || |||| | | || || ||| || Sbjct 130553 CAAAGTATCGTAGATACCATCAATACTGTCCTCCTTCATGTCGATGAGGAAGCAAGATGA 130494 Query 48584 CATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTT 48643 | ||| | || ||| || | | ||| | |||||| || ||||| |||| | || Sbjct 130493 AAGTTGTGCTTGTGGAGTACCCGCAGAAAAGAGTGTTGGGGAAGCATGTGTAAAGTACTT 130434 Query 48644 CTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATC-CCATTGATGTATACCTA 48702 | ||| | ||| || |||||||| ||| || || ||||| || | || ||||| | Sbjct 130433 GTTTGACATCAAGTTGTATGTTTCGATAGCACTTTCGATATCATCACCG-TGAATACCAA 130375 Query 48703 TAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAA 48762 | |||||||| | ||| | |||||| | ||| ||| |||| || | |||| Sbjct 130374 CGGCAACACGCATGATCATTTGTTGAGGACGTTCCGCAACTTTGCCATCAAGACGTAAAA 130315 Query 48763 GATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTA--TGAAA 48807 |||||||| || | || ||||| || || || | ||| ||||| Sbjct 130314 GATATGATCGCTCAAGGGTCTTAAATCCGAAGTATTGGTAGTTGAAA 130268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562106579670240