Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq9 170 4e-37 >seq9 Length=1448665 Score = 170 bits (188), Expect = 4e-37 Identities = 354/520 (68%), Gaps = 19/520 (4%) Strand=Plus/Minus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 ||||| || || ||||| || || || ||||| ||||| || |||| || ||||||||| Sbjct 449018 TGGTAATCTCCAACTCTCTTTTCGAAAAAGTTGGTCTTGCCAGCCAAGGAAATGTTCTCC 448959 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGG-CCCATCTGTTCCAGCAG 47958 |||||| ||| ||||||| | || || || |||| |||| | || || Sbjct 448958 ATGAAGTCGAATGGGTTGGCAGACTTGTAGACTT-TGTCGTTACCCAAAGCAACGAGGAG 448900 Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018 |||| |||||| |||| ||||||| |||||| || ||||||||| | ||||| Sbjct 448899 ACGATCAGCGACGAACTCAATGTATTGCTTCATGAGAGTAGAGTTCATGCCCAAGAGGGC 448840 Query 48019 CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTG 48078 || | ||||| || | || || | || || | |||||||| | | | Sbjct 448839 GCAAGGAAGAGCCTCGGTCAAGAATTCTTGTTCGATTTCAACGGCTTCGGTAATGACAT- 448781 Query 48079 CTTAACGCGGGACTCTGAGGGTTTGT-TGCGCAGGTGCTTGGCAT------AGAGCATGC 48131 ||| |||| | ||||| || || |||||||| || | || | || Sbjct 448780 CTT------GGACG--GCTTGTTTGGATGGGC-GGTGCTTGAGATGAGAGAAAAGGAGGC 448730 Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191 | || || || |||| | |||||||| ||| |||||| ||||||||||| ||| | Sbjct 448729 ATGCGAAATCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTC 448670 Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251 ||| ||||| || | || ||||||||||| || | |||||||| ||||||||||||| Sbjct 448669 CAGCCATGAGACCACGCTTCTTGAGCCAGAAGATGGATGCGAAAGATCCAGAGAAGAAGA 448610 Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGA 48311 | ||||| || || ||||| || ||| | | | || | || |||||||||| | Sbjct 448609 TACCCTCAACAGCGGCGAATGCAACGAGACGTTGAGCAAAGGTAGAGTTCTTGTCTTGAA 448550 Query 48312 TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 |||| | |||||||| ||||||||||| ||||| || Sbjct 448549 TCCATTTGACAGCCCAGTCGGCCTTCTTCTTAATGCAAGG 448510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931529120445440