Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq36 111 8e-20 >seq36 Length=569963 Score = 111 bits (122), Expect = 8e-20 Identities = 178/253 (70%), Gaps = 2/253 (1%) Strand=Plus/Minus Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965 ||| || |||| | ||||| || ||| || ||||| |||||||||| ||||| || Sbjct 130892 CCATTCTCCATTCTTTTCAACACGCTTCATGAACAAATCAGGAATCCACAAGGCATAGAA 130833 Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAA-TCAA 26024 | ||| | ||| | | |||||| || ||||| || || |||||| |||||| || | Sbjct 130832 GAGATCGCGCGCACGAACTTCTTCCTTACCGTGGTTTTTGCGTAGATC-AAGAAACTCGA 130774 Query 26025 AAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCAC 26084 ||| ||| | |||||||| || | || | |||||| ||| | ||| |||| Sbjct 130773 AAACATCGGCATGCCATGGCTCAAGGTAAACAGCAAACGCACCAGGACGTTTGTTACCAC 130714 Query 26085 CTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTG 26144 ||||||| || ||||| ||||| | ||||||||| | ||| ||||| | ||| | | Sbjct 130713 CTTGATCAACATATCTGGCAGTGTTGTTGAAAACTCGAAGCATGGGAACAATACCATTGG 130654 Query 26145 AAAATCCGTTTGT 26157 || |||||| || Sbjct 130653 AATTTCCGTTGGT 130641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039025479700