Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq36 269 3e-67 seq9 105 8e-18 seq21 91.5 2e-13 >seq36 Length=569963 Score = 269 bits (298), Expect = 3e-67 Identities = 1171/1815 (65%), Gaps = 63/1815 (3%) Strand=Plus/Plus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGCATCCTCAT 75204 ||||| || | || ||||||||| || | |||||| ||| || ||||||| | Sbjct 130281 TACTTCGGATTTAAGACCCTTGAGC-GATCATATCTTTTACGTCTTGATGGCAAAGTTGC 130339 Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264 |||| || || | ||| ||||||| || || | || || ||||| || || || || Sbjct 130340 GGAACGTCCTCAACAAATGATCATGCGTGTTGCCGTTGGTATTCACGGTGATGATATCGA 130399 Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAA 75323 || | || |||||| || |||||| | | ||| || | || || | |||| Sbjct 130400 AAGTGCTATCGAAACATACAACTTGATGTCAAACAAGTACTTT-ACACATGCTTCCCCAA 130458 Query 75324 CCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACA 75383 | ||||| ||| ||||| ||| | | || | || ||||||||| |||| || | Sbjct 130459 CACTCTTTTCTGCGGGTACTCCACAAGCACAACTTTCATCTTGCTTCCTCATCGACATGA 130518 Query 75384 AGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGT 75443 |||||||| || | |||||||| | ||| | | | ||||| ||||||||| Sbjct 130519 AGGAGGACAGTATTGATGGTATCTACGATACTTTGAAGATTTGTGCCATGATCTCAAAGA 130578 Query 75444 GGGCTGGGGGTATTGGG------ATGCACA---TCCATGATGTGAGAGCCAATAAATCTC 75494 || || |||||||| || |||| ||| || | | || ||| ||| | Sbjct 130579 ATGCCGGTGGTATTGGTCTCAACATTCACAGAATCCGTGCTACTGGTGC--ATACATCGC 130636 Query 75495 GTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACG 75554 || || || || | || |||||||| |||| |||||||| || || ||| Sbjct 130637 C-------GGTACCAACGGAAATTCCAATGGTATTGTTCCCATGCTTCGAGTTTTCAACA 130689 Query 75555 CCACAGCGCGCTATGTAAATCAAGCGGGGCGTCGCAAGG---GGTCCATC-GCGGTCTAC 75610 ||| || | ||||| |||||| | || | | | ||| | | || || ||| Sbjct 130690 ACACTGCCAGATATGTTGATCAAG-GTGGTAACAAACGTCCTGGTGCGTTTGCTGTTTAC 130748 Query 75611 TTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGAC 75670 | || ||||||||||||||| | | ||||| ||||| |||| ||||| ||| | Sbjct 130749 CTTGAGCCATGGCATGCCGATGTTTTCGAGTTTCTTGATCTACGCAAAAACCACGGTAAG 130808 Query 75671 GAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAG 75730 ||||| | ||| | |||||||| | || |||||||||| || | ||||||||| Sbjct 130809 GAAGAAGTTCGTGCGCGCGATCTCTTCTATGCCTTGTGGATTCCTGATTTGTTCATGAAG 130868 Query 75731 CGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTG-TCCAGACAAGGCACCAGGTCTCTC 75789 || ||||| || ||| ||||| ||||| | || ||| || || || ||| | | Sbjct 130869 CGTGTTGAAAAGAATGGAGAATGGACTCTTATGTGCCCCAATGAATGC-CCTGGTTTGGC 130927 Query 75790 CGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGG-AGGGTAGAG 75848 || | || |||||||| || || |||||| | |||||| ||| ||| || | Sbjct 130928 AGATGTTTATGGCGAGGAGTTCGAGGCTCTCTACGAGAGTTATGAAAAGGCAGGAAAGGG 130987 Query 75849 --CCAATGCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGG 75905 ||| |||| | | || | | | | ||||| | ||||||| | | || || | Sbjct 130988 TCGCAA---GACTAT-CAAGGCTCAAAAGCTTTGGTACTCTATTCTTGAGGCTCAAACCG 131043 Query 75906 AGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGA 75965 |||| |||| || | ||||||||||| ||||| || ||||||||||| |||||||||| Sbjct 131044 AGACCGGAAATCCTTTCATGCTTTACAAAGATGCATGCAACAAGAAGAGCAACCAAAAGA 131103 Query 75966 ATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGG 76025 | | || || || ||||| || | ||||| || || | |||||| | | | Sbjct 131104 ACCTTGGTACTATTCGCAGCTCCAACTTGTGCACAGAGATCGTTGAGTACTCTGCACCAG 131163 Query 76026 ATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA--ATGAA-G 76082 ||||| ||| || || ||||| ||||| || || |||| | |||| ||||| | Sbjct 131164 ATGAGGTTGCTTGCTGTAACTTGGCTTCAATTGCTCTACCAACTTTCGTCAACATGAATG 131223 Query 76083 AGACTCGCACTTTTGATTATGAAAAACTTCATGAAATC-ACAAAGATTGTTACCAAAAAT 76141 || | |||| ||||| |||| ||||| || || | ||| |||| | ||| Sbjct 131224 AG---GGAACTTATGATTTCCAAAAGCTTCACGAGGTCGTCCAAG-TTGTCGTTAGAAAC 131279 Query 76142 CTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATG 76201 | ||| ||||||| | || | |||||| || | || ||||| ||| | Sbjct 131280 TTGAACAAGATCATTGATATCAACTATTATCCAGTACAAGAAGCCAGAAAGAGCAATTTC 131339 Query 76202 CGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT--TTGTGCC 76259 || ||| ||||||| | | | |||||||||||||| || |||| ||| || | | | Sbjct 131340 CGTCACCGACCTATCGCTGTTGGTGTTCAAGGTCTTGCTGATG-CTTTCTTGGCTCTTCG 131398 Query 76260 GCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGT 76319 || | |||||||||| ||||||||| | | || | || || || ||||| | Sbjct 131399 TCTTC-CATTTGATTCGCCAGAAGCCAAGCACCTCAACATCCAGATTTTCGAGACCATTT 131457 Query 76320 ATCACGCATCCCTGGAGGCGAGTTGT-GAATTGGCTGAAGCCCAAGGTTCCTATGAGACA 76378 | ||||| | ||| || | ||| || | || | | | || | || || || Sbjct 131458 ACCACGC-TGCCTTGACCTCATCTGTCGAGATTGCAAAGGAACTTGGCCCGTACGAAACC 131516 Query 76379 TTTGAGGGTTCTCCCGCGTC-CCAAGGG-GTGCTTCAGTTTGATATGTGGGAAGGTGAAA 76436 | | | || ||||| ||| ||||||| | || || | ||| ||||||| | | Sbjct 131517 TATCAAGG--CTCCCCAGTCTCCAAGGGTGAACTCCAATATGACATGTGGG--GCGTCAC 131572 Query 76437 CCAAGCTCA--ACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCG 76494 || || | | || ||||| | | ||| || ||||||| | | || |||| Sbjct 131573 CCCTTCTGATTTGTGGGATTGGGACTCTTTGAAGCAATCCATCAAGCAACACGGAATTCG 131632 Query 76495 TAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAA 76554 ||| ||| | | ||||| ||||| || || || |||||||| | ||| || Sbjct 131633 CAACTCCCTTCTCGTTGCACCTATGCCTACTGCTAGTACTTCACAAATCCTCGGTTTCAA 131692 Query 76555 TGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTT 76614 ||||| || |||||||| || ||||||||||| | | || || || || || Sbjct 131693 CGAATGTTTCGAACCATATACTTCAAACATCTACTCACGTCGTGTTCTAGCTGGAGAATT 131752 Query 76615 TGTCATTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGA 76674 |||| ||| ||| |||| ||||| | | || ||||||||||| | | Sbjct 131753 CCAAGTTGTTAACCCATGGCTCCTCAAAGACCTTGTGGATATGGGTCTCTGGTCTGACAA 131812 Query 76675 TATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGA 76734 |||||| | | || | | ||||| || |||||||| ||| | | || |||| Sbjct 131813 CATGAAGAACCGTATCATTGCCGATGGTGGATCGATTCAAAACATCCCCAACATTCCAGC 131872 Query 76735 TGATATCAAGAATCTCTACCGCACAGTGTGGGAAA--TCAAGATGAAAGATGTCATTGAC 76792 ||| ||||| || ||| || || ||||||| || | ||| | | || | Sbjct 131873 TGACATCAAAGCCCTTTACAAGACTGTTTGGGAAATTTCTCAACGAACAA--TTGTTCAA 131930 Query 76793 ATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAA 76852 ||||| || ||||||||| || || |||||| |||| ||||| | |||| | Sbjct 131931 ATGGCTGCTGATCGTGGTGCATTTATCGATCAATCTCAATCAATGAACATTCACATGAAG 131990 Query 76853 AGTCCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAA 76912 ||| || ||| |||| || | ||||||||| | | |||||| ||| | || Sbjct 131991 GATCCTACAATGGGCAAGATCACATCTATGCATTTTGCTGGATGGAAATTGGGTTTGAAG 132050 Query 76913 ACCGGAATGTACTAT 76927 ||||||||||||||| Sbjct 132051 ACCGGAATGTACTAT 132065 >seq9 Length=1448665 Score = 105 bits (116), Expect = 8e-18 Identities = 152/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTT---GACACAAAGTCT 65064 || || || ||| |||||||||| | ||||| | |||||| || |||| || ||| Sbjct 448507 GTTCCTTGCATTAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGACAAGAACTCT 448566 Query 65065 CGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGG 65124 |||| || | || || |||| || || ||| ||||||||||||||||| || Sbjct 448567 A---CCTTTGCTCAACGTCTCGTTGCATTCGCCGCTGTTGAGGGTATCTTCTTCTCTGGA 448623 Query 65125 TCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCA 65184 || ||| | || | ||| | |||||||| ||||||||| | || || |||||| Sbjct 448624 TCTTTCGCATCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGGCTGGACTCACCTTCTCC 448683 Query 65185 AATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 || ||||| || ||||| || || ||||||||| Sbjct 448684 AACGAACTCATCTCCCGTGACGAAGGTCTCCAC 448716 >seq21 Length=916854 Score = 91.5 bits (100), Expect = 2e-13 Identities = 170/250 (68%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 27781 CCAGTAGATCCAAATCCACCCGCACCTCTCTCTGTCTCTTCAAGAACACCAATTTCCTGC 27840 |||||| |||||| || ||| |||| ||| | ||||||| | ||| | |||| Sbjct 281114 CCAGTACTTCCAAAACCCCCCTCACCCCTCGCACTCTCTTCCAAAACCAAGACTTCCGTG 281173 Query 27841 ACATCGGGTGTTTCACAGCGCTCAAGGACAAGTTGTGCGATGCGATCCCCTTTCTTTACC 27900 || || ||||| | | | ||| | | | ||||| | ||||| || | ||| ||| Sbjct 281174 ACCTCAGGTGTATAAATCCTCTCCAAAATCAACTGTGCAACACGATCGCCCTCCTTCACC 281233 Query 27901 TCAAAGTCTTTGTCTCCGTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGA 27960 ||| | || || || ||||| || ||||| | ||||| |||| ||| |||| || | Sbjct 281234 TCATAATCCTTTTCGCCGTGGTTAAAGAGGAGTACTTTTACTTGACCCCTATAATCAGCG 281293 Query 27961 TCAATAACACCCGCACCAACTTGAATACCATGCTTCACAGCGAGACCGGATCGTGGTGCA 28020 || || ||||| |||||| | ||| ||| || ||||||||||| ||||| || Sbjct 281294 TCGATTACACCGGCACCAGTATCAATCATATGTTTGGAGGCGAGACCGGAACGTGGGGCG 281353 Query 28021 ACACGACCAT 28030 | || |||| Sbjct 281354 ATGCGGCCAT 281363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596567243550080