Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq1 114 2e-20 >seq1 Length=2965994 Score = 114 bits (126), Expect = 2e-20 Identities = 140/190 (74%), Gaps = 1/190 (1%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | || || ||||||||||| || || |||||||| || ||| ||| Sbjct 1569871 ATGCAAATCTTTGTCAAGACCTTGACTGGAAAGACCATCACATTAGAGGTAGAATCTTCA 1569812 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| || || || || || |||||||| || || || || || || ||| Sbjct 1569811 GATACTATTGATAATGTTAAGGCCAAGATTCAAGATAAGGAGGGTATTCCACCTGATCAA 1569752 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| ||||||| | ||||| |||||| | || ||| ||||||| | | ||||| || Sbjct 1569751 CAACGATTGATCTTCGCCGGAAAGCAGTTGGAGGATGGCAGAACTCTTTTGGATTACAAC 1569692 Query 156003 ATATCCAAAG 156012 || || |||| Sbjct 1569691 AT-TCAAAAG 1569683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731869109105600