Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 2e-11 >seq1 Length=2965994 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || || || ||| | ||||| || || || || | || ||| | Sbjct 1570099 ATGCAAATCTTCGTTAAGACTCTCACCGGAAAGACGATCACTTTAGAGGTTGAGTCATCG 1570040 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | || || |||||| |||||||| ||| | ||| |||||| Sbjct 1570039 GACACCATCGACAACGTGAAGGCTAAGATTCAAGACAAAGAGGGCATTCCCCCTGATCAA 1569980 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | ||||| | ||| ||||| || || ||||||| | | || | | || |||||| Sbjct 1569979 CAACGTCTTATCTTTGCTGGTAAGCAACTTGAGGATGGCCGCACTCTTTCCGACTACAAC 1569920 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGT 110481 || ||||||||||| || || || |||| Sbjct 1569919 ATCCAAAAAGAATCGACTTTACATTTGGT 1569891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840010043788