Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq9 89.7 8e-12 >seq9 Length=1448665 Score = 89.7 bits (98), Expect = 8e-12 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||||||||| || ||| | ||||||| ||| ||| || | |||||| || ||||| Sbjct 448710 ACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCAGCCATGAGACCACGCTT 448651 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||| ||||||| |||| || ||||| ||||| ||||| || ||||| || Sbjct 448650 CTTGAGCCAGAAGATGGATGCGAAAGATCCAGAGAAGAAGATACCCTCAACAGCGGCGAA 448591 Query 794460 GCCGACGAGCCGCTCGGCAAAAGT 794483 | ||||| || | ||||| || Sbjct 448590 TGCAACGAGACGTTGAGCAAAGGT 448567 Score = 87.8 bits (96), Expect = 3e-11 Identities = 151/216 (70%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 793926 TCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCC 793985 |||||||||||||||||||| | | || || |||||| | ||| |||||||| Sbjct 448997 TCGAAAAAGTTGGTCTTGCCAGCCAAGGAAATGTTCTCCATGAAGTCGAATGGGTTGGCA 448938 Query 793986 GTCAGGTAGTGCTTCTCG-CACCC-GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAA 794043 | | |||| || ||| |||| ||| ||| || || || || |||||||| |||| Sbjct 448937 GACTTGTAGACTTTGTCGTTACCCAAAGCAACG--AGGAGACGATCAGCGACGAACTCAA 448880 Query 794044 TGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGA 794103 |||| || |||||| | | ||||||||| | ||| || || || | |||| | | Sbjct 448879 TGTATTGCTTCATGAGAGTAGAGTTCATGCCCAAGAGGGCGCAAGGAAGAGCCTCGGTCA 448820 Query 794104 CAAACTCTTTCTCGATCTCGACGGCCTCGATGATGA 794139 || |||| ||||| || ||||| ||| | |||| Sbjct 448819 AGAATTCTTGTTCGATTTCAACGGCTTCGGTAATGA 448784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916212785638724