Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq36 208 2e-48 seq9 113 1e-19 >seq36 Length=569963 Score = 208 bits (230), Expect = 2e-48 Identities = 493/738 (67%), Gaps = 9/738 (1%) Strand=Plus/Plus Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 |||||||||||||| ||| | | |||||||| |||||||||| || ||||||| || Sbjct 130341 GAACGTCCTCAACAAATGATCATGCGTGTTGCCGTTGGTATTCACGGTGATGATATCGAA 130400 Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483 || ||| ||| || | | | || ||| | || |||||| | || || Sbjct 130401 AGTGCTATCGAAACATACAACTTGATGTCAAACAAGTACTTTACACATGCTTCCCCAACA 130460 Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAAC 110543 || ||| || || ||| || |||| | | |||||||| || | | || || Sbjct 130461 CTCTTTTCTGCGGGTACTCCACAAGCACAACTTTCATCTTGCTTCCTCATCGACATGAAG 130520 Query 110544 GATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC-TGCTCTTATTTCTAAAAA 110602 || || |||||| ||||| || ||| || || |||| ||| | || || || || Sbjct 130521 GAGGACAGTATTGATGGTATCTACGATACT-TTGAAGATTTGTGCCATGATCTCAAAGAA 130579 Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAAC 110662 | || || |||||| | || |||| || || | | || ||| | ||||| Sbjct 130580 TGCCGGTGGTATTGGTCTCAACATTCACAGAATCCGTGCTACTGGTGCATACATCGCCGG 130639 Query 110663 AGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAA 110722 | || || ||| | ||| ||||||| ||| | |||| |||||| ||||||| | Sbjct 130640 TACCAACGGAAATTCCAATGGTATTGTTCCCATGCTTCGAGTTTTCAACAACACTGCCAG 130699 Query 110723 ATATGTGAATCAAGGTGGTAAGA---GAAATGGCTCATTTGCTATCTATCTCGAACCTTG 110779 |||||| ||||||||||||| | | ||| | |||||| | || || || || || Sbjct 130700 ATATGTTGATCAAGGTGGTAACAAACGTCCTGGTGCGTTTGCTGTTTACCTTGAGCCATG 130759 Query 110780 GCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAG 110839 |||| | ||| | || || || | || || || ||||| || || |||||| | Sbjct 130760 GCATGCCGATGTTTTCGAGTTTCTTGATCTACGCAAAAACCACGGTAAGGAAGAAGTTCG 130819 Query 110840 AGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGA 110899 || || ||| | || ||||| |||||||| | ||||| |||||||| |||||| || | Sbjct 130820 TGCGCGCGATCTCTTCTATGCCTTGTGGATTCCTGATTTGTTCATGAAGCGTGTTGAAAA 130879 Query 110900 AAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGG 110959 ||||| ||| |||||||||| || || | |||||| | | ||||| ||||| Sbjct 130880 GAATGGAGAATGGACTCTTATGTGCCCCAATGAATGCCCTGGTTTGGCAGATGTTTATGG 130939 Query 110960 AAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAA-ACAAA 111018 | ||||| || | || ||||| | |||||||| | ||| ||| |||||| || | Sbjct 130940 CGAGGAGTTCGAGGCTCTCTACGAGAGTTATGAAAAGGCAGGAAAGGGTCGCAAGACTA- 130998 Query 111019 TTCCA-GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCT 111077 || | |||||| | ||||||| | || ||||| | ||| || || |||| |||| Sbjct 130999 -TCAAGGCTCAAAAGCTTTGGTACTCTATTCTTGAGGCTCAAACCGAGACCGGAAATCCT 131057 Query 111078 TATATTTTGTATAAAGAT 111095 | || | || |||||| Sbjct 131058 TTCATGCTTTACAAAGAT 131075 >seq9 Length=1448665 Score = 113 bits (124), Expect = 1e-19 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 131783 AAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCC 131842 ||| ||||| ||||| ||||| || || |||||| | |||||||||||||| | | Sbjct 448504 AAAGTTCCTTGCATTAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGACAAGAAC 448563 Query 131843 GCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGT 131902 ||| ||| || | | || || || || || |||||| ||||| ||||| || || Sbjct 448564 TCTACCTTTGCTCAACGTCTCGTTGCATTCGCCGCTGTTGAGGGTATCTTCTTCTCTGGA 448623 Query 131903 GCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCC 131962 ||||| | ||||| ||||| ||||||||||| | ||| |||||||| | || ||| Sbjct 448624 TCTTTCGCATCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGGCTGGACTCACCTTCTCC 448683 Query 131963 AATCAATTCATCTCGAGAGATGAAG 131987 || || ||||||| | || |||| Sbjct 448684 AACGAACTCATCTCCCGTGACGAAG 448708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186807994891676