Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq4 111 1e-19 seq1 87.8 1e-12 >seq4 Length=2737121 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | | ||||||||| || || |||||| ||| ||||| |||||||| |||| Sbjct 1682892 CACCACCACGGAGACGTAACACTAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGG 1682951 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | || ||||| | || || | ||| |||||||| || ||||| ||||| || || | | Sbjct 1682952 AAAGGGTGCGGCCATCCTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTG 1683011 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | || || ||||| || || ||| | ||| ||| | |||||| || || Sbjct 1683012 GGATTCCCTCCTTGTCTTGGATCTTGGCTTTGA-CATTGTCGATGGTGTCCGAAGACTCA 1683070 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | ||||| ||||| || || | || || || ||||||||||| Sbjct 1683071 ACCTCGAGGGTGATAGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 1683120 >seq1 Length=2965994 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | |||||| || | ||||| || ||||| ||||||||||| | Sbjct 1569644 ACCACCACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATGTTGTAATCCAA 1569703 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | | || ||||| || |||||||| || ||||| || || ||||| | || Sbjct 1569704 AAGAGTTCTGCCATCCTCCAACTGCTTTCCGGCGAAGATCAATCGTTGTTGATCAGGTGG 1569763 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| || || || ||| || | | ||||| || | || || ||||| | Sbjct 1569764 AATACCCTCCTTATCTTGAATCTT-GGCCTTAACATTATCAATAGTATCTGAAGATTCTA 1569822 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || || || || || || || |||||||| |||||| Sbjct 1569823 CCTCTAATGTGATGGTCTTTCCAGTCAAGGTCTTGACAAAGATTTGCATA 1569872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328702734078720