Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq36 82.4 7e-11 >seq36 Length=569963 Score = 82.4 bits (90), Expect = 7e-11 Identities = 176/259 (68%), Gaps = 8/259 (3%) Strand=Plus/Minus Query 138144 GTTGAGGCCGATGCCGCCTCCGTGTTTAGATATCATGGCACAATCGTTGAGAGTTCTATA 138203 |||||| || || || || | | || || |||||||||||| || | ||| || Sbjct 130601 GTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCACAAATCTTCAAAGTATCGTA 130542 Query 138204 GATGCCGTTTATGCTGTCTTCCTGGATGTTGAGTAGATAACACGACGACATTTGAGGCAT 138263 ||| || | || ||||| |||| |||| || || | || || || | ||| | | | Sbjct 130541 GATACCATCAATACTGTCCTCCTTCATGTCGATGAGGAAGCAAGATGAAAGTTGTG-CTT 130483 Query 138264 TTTCA-TGCCAGCCGAGAATAGAGTGGGACTAGCGTGGGTAAA---CATTTTCGAGCGCA 138319 | | | || || || || || || || ||| || ||||| | | || || || Sbjct 130482 GTGGAGTACCCGCAGAAAAGAGTGTTGGGGAAGCATGTGTAAAGTACTTGTTTGA---CA 130426 Query 138320 TCAATCTATATGACTCGATCGCACTCTCGATATCATCACCATGAATCTGAAGAGCGACAC 138379 |||| | |||| ||||| ||||| |||||||||||||| ||||| || || |||| Sbjct 130425 TCAAGTTGTATGTTTCGATAGCACTTTCGATATCATCACCGTGAATACCAACGGCAACAC 130366 Query 138380 GCATCAGCATGTGTTGAGG 138398 |||| | ||| |||||||| Sbjct 130365 GCATGATCATTTGTTGAGG 130347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445092641877120