Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq9 114 2e-19 >seq9 Length=1448665 Score = 114 bits (126), Expect = 2e-19 Identities = 145/198 (73%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 1455870 GACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCAT 1455929 ||||||||||| | |||||| ||||| ||||| || || ||| || |||||| || Sbjct 448217 GACGACGAGCGTTACTTCATCTCCCACGTTCTCGCATTCTT-CGCAGCATCCGATGGAAT 448275 Query 1455930 CGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTT 1455989 || ||||||| ||| || | || | || || ||| | ||||| ||||| | Sbjct 448276 TGTAAACGAGAACTTGGTCGAGAGATTCAGCGGTGAAGTTCAAATTCCAGAAGCACGATG 448335 Query 1455990 GTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGAT 1456049 || ||||| ||||| ||| || |||||||||||||| ||||| ||||| || || || Sbjct 448336 CTTCTACGGTTTCCAAATCATGATGGAAAACATCCACTCCGAAACATACTCTCTTCTCAT 448395 Query 1456050 CGACACCTACGTCAAGGA 1456067 |||||| ||| ||||||| Sbjct 448396 CGACACATACATCAAGGA 448413 Score = 93.3 bits (102), Expect = 6e-13 Identities = 141/194 (73%), Gaps = 10/194 (5%) Strand=Plus/Plus Query 1456122 GAAAAAGGCCGACTGGGCGATGAAGTGGAT-CAA--CAAGGAGGGCCTCGACACTTTGCC 1456178 ||| |||||||||||||| | || ||||| ||| |||| | ||| || |||||| Sbjct 448521 GAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGACAAGAA----CTCTAC-CTTTGCT 448575 Query 1456179 GAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCC 1456237 | || ||||| | || ||||| || ||||| ||||| ||||| || |||| || Sbjct 448576 CAACGTCTCGTTGCATTCGCCGCTGTTGAGGGTATCTTCTTCTCTGGATCTTTCGCATCC 448635 Query 1456238 ATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTAT 1456297 ||||| |||||||||||||| || |||||| | || | || ||| ||||||| | || Sbjct 448636 ATCTTCTGGCTCAAGAAGCGTGGTCTCATGGCTGGAC-TCACCTTCTCCAACGAACTCAT 448694 Query 1456298 CAGTCGCGACGAAG 1456311 | || ||||||| Sbjct 448695 CTCCCGTGACGAAG 448708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177780721219192