Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq4 125 7e-24 seq1 109 6e-19 >seq4 Length=2737121 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || ||||| | ||| || ||||| |||||||| |||||||||||| | Sbjct 1682894 CCACCACGGAGACGTAACACTAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAA 1682953 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || ||||| || || || || || ||||| ||||| || ||||| || Sbjct 1682954 AGGGTGCGGCCATCCTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGG 1683013 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || ||||| || || |||||| ||| | ||||| || || || || Sbjct 1683014 ATTCCCTCCTTGTCTTGGATCTTGGCTTTGACATTGTCGATGGTGTCCGAAGACTCAACC 1683073 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || ||||| || || | || || ||||| || ||||| Sbjct 1683074 TCGAGGGTGATAGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 1683120 >seq1 Length=2965994 Score = 109 bits (120), Expect = 6e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 |||| || ||||| ||||| |||||||||||| || ||| | || || || || Sbjct 1569897 TGTAAAGTCGATTCTTTTTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGTTGC 1569956 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || ||||| || | ||| || ||||| || || ||||| ||||| |||||||| || Sbjct 1569957 TTACCAGCAAAGATAAGACGTTGTTGATCAGGGGGAATGCCCTCTTTGTCTTGAATCTTA 1570016 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 || || ||| | ||||| || || || || || | ||| || || || ||||| Sbjct 1570017 GCCTTCACGTTGTCGATGGTGTCCGATGACTCAACCTCTAAAGTGATCGTCTTTCCGGTG 1570076 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 | ||| |||||||| |||||||| Sbjct 1570077 AGAGTCTTAACGAAGATTTGCAT 1570099 Score = 82.4 bits (90), Expect = 8e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || || ||||| ||||||||||| ||| | ||| || || || || || Sbjct 1570124 GTGGAGGGTAGACTCCTTCTGAATGTTGTAATCGGAGAGGGTTCGACCATCCTCAAGTTG 1570183 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || || || ||||||||||| || || ||||| || || || || || ||||| || || Sbjct 1570184 CTTTCCGGCGAAAATCAAACGTTGTTGGTCGGGGGGAATTCCCTCCTTATCTTGGATCTT 1570243 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||||| ||| | |||||| || || || || || || ||||| || ||||| Sbjct 1570244 GGCCTTGACATTGTCGATAGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTTCCGGT 1570303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505396403676320