Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq2 114 1e-20 >seq2 Length=2942574 Score = 114 bits (126), Expect = 1e-20 Identities = 245/362 (68%), Gaps = 13/362 (4%) Strand=Plus/Plus Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 ||||| || |||| ||||| ||| | | |||||||| || |||||||| |||||||| Sbjct 1623846 CCCAAGGTTATAAACGGTCCCGAAGTTCTCAATAAATACGTTGGTCAATCCGAAGAAAAC 1623905 Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG-CAAAAGTTC 19547 | || | || || || || ||| ||| | | || | |||| | | | ||| Sbjct 1623906 ATCCGGAAGCTCTTCGCCGATGCCGAA-AAGGAGTACAAGGAAAAGGGAGACGAGAGTGG 1623964 Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGG--- 19604 | || || || || | ||||||||||| || | || ||||| |||||| ||| Sbjct 1623965 CCTTCATATCATCATTTTCGATGAATTGGATGCTGTATGCAAGCAGAGAGGTAGTGGAGC 1624024 Query 19605 ------TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGG 19658 || || ||| || |||| ||| ||||||||||| |||| ||| | || || Sbjct 1624025 AGGTGGTGGAACTGGCGTTGGAGACAGTGTCGTCAATCAACTGTTGTCTAAACTCGATGG 1624084 Query 19659 TGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGA 19718 |||| |||| || || |||||| | ||||||| ||||| ||| | |||| | || || Sbjct 1624085 TGTTGACCAGCTCAACAATATTCTTCTTATTGGAATGACCAATCGTATGGATATGATTGA 1624144 Query 19719 CAGCGC-CTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATG 19777 ||| ||| ||| |||| || || ||||| | | || |||||| || || |||| Sbjct 1624145 TGACGCTCTTCTTA-GACCAGGACGTCTGGAAGTTCACATGGAAATTTCTTTGCCAGATG 1624203 Query 19778 AA 19779 || Sbjct 1624204 AA 1624205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397454469297580