Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq36 163 4e-35 seq9 134 2e-26 >seq36 Length=569963 Score = 163 bits (180), Expect = 4e-35 Identities = 1010/1592 (63%), Gaps = 57/1592 (4%) Strand=Plus/Minus Query 117843 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTG 117902 |||||||| || ||||| | ||| ||||| || | |||||| || | | |||| Sbjct 132064 TAGTACATTCCGGTCTTCAAACCCAATTTCCATCCAGCAAAATGCATAGATGTGATCTTG 132005 Query 117903 GAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCC 117962 | || ||| | |||| | |||||| ||| ||||||||||| || || Sbjct 132004 CCCATTGTAGGATCCTTCATGTGAATGTTCATTGATTGAGATTGATCGATAAATGCACCA 131945 Query 117963 CGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTCCTGTAGA 118020 ||||| || ||||| | || || || ||| | || ||||||| |||||| |||| | Sbjct 131944 CGATCAGCAGCCATTTGAA-CA-ATTGTTCGTTGAGAAATTTCCCAAACAGTCTTGTAAA 131887 Query 118021 GGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCA 118080 || || || ||| |||| || | ||| ||||| || |||||||| | | | | Sbjct 131886 GGGCTTTGATGTCAGCTGGAATGTTGGGGATGTTTTGAATCGATCCACCATC---GGCAA 131830 Query 118081 TGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG-- 118135 ||| | | |||||| | | ||||||||||| || | || || | | ||| Sbjct 131829 TGATACGGTTCTTCATGTTGTCAGACCAGAGACCCATATCCACAAGGTCTTTGAGGAGCC 131770 Query 118136 ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTC-TCAGATAGATATTGGTCG 118194 ||| | | ||||| || || || || || || | | || ||||| || | | Sbjct 131769 ATGGGT--TAACAACTTGGAATTCTCCAGCTAGAACACGACGTGAG-TAGATGTTTGAAG 131713 Query 118195 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGG 118254 | ||||| || || || || ||| ||| | |||||| | || || || ||||| | Sbjct 131712 TATATGGTTCGAAACATTCGTTGAAACCGAGGATTTGTGAAGTACTAGCAGTAGGCATAG 131653 Query 118255 GTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCC 118314 |||| | ||||||| ||| || | || | || | | ||| || ||| | || ||||| Sbjct 131652 GTGCAACGAGAAGGGAGTTGCGAATTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCCC 131593 Query 118315 AGTCGTAGT--TGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGA 118372 | || | | || | | || |||||| ||| | ||||| ||| | ||| Sbjct 131592 AATCCCACAAATCAGAAGGGGTGACGCC--CCACATGTCATATTGGAGTTCACCCTTGGA 131535 Query 118373 CGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGG-AGCTCG 118431 |||| || || | | | || || || ||||| ||| || | ||| || | Sbjct 131534 GACTGGGGAGCCTTGATAGGTTTCGTACGGGCCAAGTTCCTTTGCAATCTCGACAGATGA 131475 Query 118432 CCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGT 118491 || ||| | ||||| || || || || ||||| | || | |||||| || Sbjct 131474 GGTCAAGG-CAGCGTGGTAAATGGTCTCGAAAATCTGGATGTTGAGGTGCTTGGCTTCTG 131416 Query 118492 CGGAATCAAACGCGAGTCGGC-ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 118550 |||||||| | || || | || ||| |||| || |||||||| ||||| | Sbjct 131415 GCGAATCAAATGGAAGACGAAGAGCCAAGAAAG-CATCAGCAAGACCTTGAACACCAACA 131357 Query 118551 CCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTA 118610 | || || || || | | ||| ||| | || | || |||||| | || || Sbjct 131356 GCGATAGGTCGGTGACGGAAATTGCTCTTTCTGGCTTCTTGTACTGGATAATAGTTGATA 131297 Query 118611 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAA 118670 || || | | | || | ||| | |||||| | || || |||||||||| | || Sbjct 131296 TCAATGATCTTGTTCAAGTTTCTAACGACAACTTGGACGACCTCGTGAAGCTTTTGGAAA 131237 Query 118671 TCAAAACTGCGAGTCTC-TTCAT--TGACATACTTAGGAAGGGCGATTGACGCCAGATTA 118727 ||| || | | ||| ||||| |||| | | || || || ||||| |||| ||| Sbjct 131236 TCATAAGTTCC---CTCATTCATGTTGACGAAAGTTGGTAGAGCAATTGAAGCCAAGTTA 131180 Query 118728 CACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTC 118787 || || |||||| ||| |||||| | || || ||||||||||| || || Sbjct 131179 CAGCAAGCAACCTCATCTGGTGCAGAGTACTCAACGATCTCTGTGCACAAGTTGGAGCTG 131120 Query 118788 TTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATG 118847 ||| || || | ||||||||| || ||| |||| || ||||| |||||||||||| Sbjct 131119 CGAATAGTACCAAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATG 131060 Query 118848 TATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGCTGGC 118907 | || | || ||||| ||||| | || ||||||| | ||| | | ||| Sbjct 131059 AAAGGATTTCCGGTCTCGGTTTGAGCCTCAAGAATAGAGTACCAAAGCTTTTGAGCCTTG 131000 Query 118908 ACAGTGGCGTTGGCTCGCCCCT---CTTCC---TCGTACTTTGTGTAGAGGGCTTCAAAC 118961 | ||| ||| || |||| || || || || | |||||| || || ||| Sbjct 130999 ATAGT---CTTG---CGACCCTTTCCTGCCTTTTCATAACTCTCGTAGAGAGCCTCGAAC 130946 Query 118962 TCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTT-ATCTGGGCAGAAGAGAGACCATTG 119020 || || || | |||| | || || || || || ||||| | |||| ||||| Sbjct 130945 TCCTCGCCATAAACATCTGCCAAACCAGG-GCATTCATTGGGGCACATAAGAGTCCATTC 130887 Query 119021 ACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATC 119080 ||| || ||||| ||||||||||| | || || ||||| | || |||||||||| Sbjct 130886 TCCATTCTTTTCAACACGCTTCATGAACAAATCAGGAATCCACAAGGCATAGAAGAGATC 130827 Query 119081 CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATC 119140 || ||| ||||||| | || || || || | || | ||| || | | ||| Sbjct 130826 GCGCGCACGAACTTCTTCCTTACCGTGGTTTTTGCGTAGATCAAGAAACTCGAAAACATC 130767 Query 119141 CGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCTG 119194 || ||||| || || ||||| || || | || | | |||| |||| | || Sbjct 130766 GGCATGCCATGGCTCAAGGTAAACAGCAA---ACGCACCAGGACGTTTGTTACCACCTTG 130710 Query 119195 GTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTG 119254 | ||||| || |||||| ||| || || |||||||| |||| ||||||| ||| | Sbjct 130709 ATCAACATATCTGGCAGTGTTGTTGAAAACTCGAAGCATGGGAACAATACCATTGGAATT 130650 Query 119255 GCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCA 119312 || || || || ||| || | || | | || | || ||| |||| | |||| Sbjct 130649 TCCGTTGGTACCGGCGATGTATG-CAC-CAGTAGCACGGATTCTGTGAATGTTGAGACCA 130592 Query 119313 ATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCG 119372 ||||| || || ||||||||| || || | | | | | ||||||| ||||| Sbjct 130591 ATACCACCGGCATTCTTTGAGATCATGGCACAAATCTTCAAAGTATCGTAGATACCATCA 130532 Query 119373 ATCGAGTCACCCTTATTTGCGATGAGGAAGCA 119404 || ||| |||| | ||||||||||||| Sbjct 130531 ATACTGTCCTCCTTCATGTCGATGAGGAAGCA 130500 >seq9 Length=1448665 Score = 134 bits (148), Expect = 2e-26 Identities = 119/149 (80%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||||||||| |||||||||||||||||||| || |||||| || || | ||||||||| Sbjct 448716 GTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCAGCCATGAGACC 448657 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 |||||||| | |||||| || | || || |||||||||||||| ||||| ||| Sbjct 448656 ACGCTTCTTGAGCCAGAAGATGGATGCGAAAGATCCAGAGAAGAAGATACCCTCAACAGC 448597 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 ||||| |||| |||||| | |||||||| Sbjct 448596 GGCGAATGCAACGAGACGTTGAGCAAAGG 448568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618432757180960