Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq36 210 3e-49 seq9 154 2e-32 >seq36 Length=569963 Score = 210 bits (232), Expect = 3e-49 Identities = 1085/1702 (64%), Gaps = 73/1702 (4%) Strand=Plus/Plus Query 104231 ATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACA 104290 ||| ||||||| || ||| | |||||||| || || || || || || | || ||| Sbjct 130356 ATGATCATGCGTGTTGCCGTTGGTATTCACGGTGATGATATCGAAAGTGCTATCGAAACA 130415 Query 104291 TACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGG 104349 ||| || |||||| | | ||| || | || || | ||||| ||||| ||| || Sbjct 130416 TACAACTTGATGTCAAACAAGTACTTT-ACACATGCTTCCCCAACACTCTTTTCTGCGGG 130474 Query 104350 TACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAA 104409 ||| ||| | | ||| | || ||||||||| |||| || ||||||||| || | Sbjct 130475 TACTCCACAAGCACAACTTTCATCTTGCTTCCTCATCGACATGAAGGAGGACAGTATTGA 130534 Query 104410 CGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGG 104469 |||||||| | ||| | | | ||||| ||||||||| || || |||||||| Sbjct 130535 TGGTATCTACGATACTTTGAAGATTTGTGCCATGATCTCAAAGAATGCCGGTGGTATTGG 130594 Query 104470 G------ATGCACA---TCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 || |||| ||| || | | || ||| ||| | || || || Sbjct 130595 TCTCAACATTCACAGAATCCGTGCTACTGGTGC--ATACATCGCC-------GGTACCAA 130645 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 || | || |||||||| |||| |||||||| || || ||| ||| || | ||||| Sbjct 130646 CGGAAATTCCAATGGTATTGTTCCCATGCTTCGAGTTTTCAACAACACTGCCAGATATGT 130705 Query 104581 AAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACG 104636 |||||| ||| | || | || | | || || || |||||||||||||| | Sbjct 130706 TGATCAAGGTGGTAA-CAAACGTCCTGGTGCGTTTGCTGTTTACCTTGAGCCATGGCATG 130764 Query 104637 CGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC- 104695 | ||| | | ||||| ||||| | || ||||| ||| | || || | | |||| Sbjct 130765 CCGATGTTTTCGAGTTTCTTGATCTACGCAAAAACCACGGTAAGGAAGAAGTTC-GTGCG 130823 Query 104696 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 104755 ||||||||||||| || | |||||||| ||| | ||||||||| | ||||| ||| | Sbjct 130824 CGCGATCTCTTCTATGCCTTGTGGATTCCTGATTTGTTCATGAAGCGTGTTGAAAAGAAT 130883 Query 104756 GGCAATTGGTCTCTCTTTTG-TCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGA 104814 || | ||| |||| | || ||| || || |||||| | | |||| || || Sbjct 130884 GGAGAATGGACTCTTATGTGCCCCAATGAATGC-CCTGGTTTGGCAGATGTTTATGGCGA 130942 Query 104815 GGAGTTTGAAGCCCTTTACACAAAGTACG---AGGAAG---AAGGTCGGGCGACTGCGAC 104868 |||||| || || || ||| | || | ||| || | ||||| |||| | Sbjct 130943 GGAGTTCGAGGCTCTCTACGAGAGTTATGAAAAGGCAGGAAAGGGTCGCAAGACTATCAA 131002 Query 104869 GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 104928 | ||| | | ||| | ||||||| || ||||||||||||| || | || Sbjct 131003 G------GCTCAAAAGCTTTGGTACTCTATTCTTGAGGCTCAAACCGAGACCGGAAATCC 131056 Query 104929 ATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 104988 | ||||||||||||||| || || ||| | ||||| || |||||||| | ||| || Sbjct 131057 TTTCATGCTTTACAAAGATGCATGCAACAAGAAGAGCAACCAAAAGAACCTTGGTACTAT 131116 Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 105048 || ||||| | || ||||| ||| | || | | | ||||||| ||| Sbjct 131117 TCGCAGCTCCAACTTGTGCACAGAGATCGTTGAGTACTCTGCACCAGATGAGGTTGCTTG 131176 Query 105049 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG-ACATTTG 105107 |||||| | || ||||| ||||| |||| | | | | || | | || | || Sbjct 131177 CTGTAACTTGGCTTCAATTGCTCT-ACCAACTTTCGTCAACATGAATGAGGGAACTTATG 131235 Query 105108 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTG 105167 ||| |||| || ||||| || || |||| | |||| | |||| | |||| Sbjct 131236 ATTTCCAAAAGCTTCACGAGGTCGTCCAAGTTGTCGTTAGAAACTTGAACAAGATCATTG 131295 Query 105168 ATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 105227 ||| || | ||| || || | || | || ||| | | ||||| || || | Sbjct 131296 ATATCAACTATTATCCAGTACAAGAAGCCAGAAAGAGCAATTTCCGTCACCGACCTATCG 131355 Query 105228 GTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTTGATT 105284 | | |||||||| ||||| || |||| ||| | |||| ||| | ||||||||| Sbjct 131356 CTGTTGGTGTTCAAGGTCTTGCTGATGCTTTCTTGGCTCTTCGTCTTC---CATTTGATT 131412 Query 105285 CCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTG 105344 | ||||| ||| | |||| | || || |||||||| || ||||| || |||| Sbjct 131413 CGCCAGAAGCCAAGCACCTCAACATCCAGATTTTCGAGACCATTTACCACGCTGC-CTTG 131471 Query 105345 A-GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCA 105403 | | | ||| | ||| ||| ||| || || ||||||| | | || || ||| Sbjct 131472 ACCTCATCTGTCGAGATTGCAAAGGAACTTGGCCCGTACGAAACCTATCAAGGCTCCCCA 131531 Query 105404 GCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTC-----AC 105457 | || |||||| | || |||| ||| |||||| || | ||| |||| Sbjct 131532 GTCTC-CAAGGGTGAACTCCAATATGACATGTGG---GGCGTCACC--CCTTCTGATTTG 131585 Query 105458 TACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTC 105517 | || ||||| || | ||| || ||||||| | | || |||| ||| || ||| Sbjct 131586 TGGGATTGGGACTCTTTGAAGCAATCCATCAAGCAACACGGAATTCGCAACTCCCTTCTC 131645 Query 105518 ATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 105577 | || || ||||| || || || |||||||| | ||| || ||||| || ||| Sbjct 131646 GTTGCACCTATGCCTACTGCTAGTACTTCACAAATCCTCGGTTTCAACGAATGTTTCGAA 131705 Query 105578 CCCTACACGACGAACATCTATCTGA-GAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA 105636 || || || | |||||||| || | | | || || ||||| || |||| || Sbjct 131706 CCATATACTTCAAACATCTA-CTCACGTCGTGTTCTAGCTGGAGAATTCCAAGTTGTTAA 131764 Query 105637 CAAGCAT--CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGAT 105694 | ||| ||| | | ||||| || || ||||||||||| | | |||||| | Sbjct 131765 C--CCATGGCTCCTCAAAGACCTTGTGGATATGGGTCTCTGGTCTGACAACATGAAGAAC 131822 Query 105695 CTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAG 105754 | || | | ||||| || |||||||| || | |||||| ||| || || Sbjct 131823 CGTATCATTGCCGATGGTGGATCGATTCAAAACATCCCCAACATTCCAGCTGACATCAAA 131882 Query 105755 AAGTTGTACCGCACAGTTTGGGAAA--TCAAGATGAAGGATGTCATTGACATGGCCGCAG 105812 | ||| || |||||||||| || | ||| | | || | ||||| || | Sbjct 131883 GCCCTTTACAAGACTGTTTGGGAAATTTCTCAACGAACAA--TTGTTCAAATGGCTGCTG 131940 Query 105813 ATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACGA 105872 |||||||| || || |||||| |||| ||||| | |||| | ||| || | Sbjct 131941 ATCGTGGTGCATTTATCGATCAATCTCAATCAATGAACATTCACATGAAGGATCCTACAA 132000 Query 105873 TGTCCAAGCTCTCTTCTATGCA 105894 || |||| || | |||||||| Sbjct 132001 TGGGCAAGATCACATCTATGCA 132022 >seq9 Length=1448665 Score = 154 bits (170), Expect = 2e-32 Identities = 350/519 (67%), Gaps = 18/519 (3%) Strand=Plus/Plus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 94792 |||||| || ||| | ||||| || || |||||| | || ||| || | |||| | | Sbjct 448506 AGTTCCTTGCATTAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGACAAGAACTC 448565 Query 94793 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 94852 | |||||||| | || ||| | ||||| || |||||||||||||||||||||||| | Sbjct 448566 -TACCTTTGCTCAACGTCTCGTTGCATTCGCCGCTGTTGAGGGTATCTTCTTCTCTGGAT 448624 Query 94853 CCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 94912 | ||| | || | |||||||||||||| ||||||||| | || ||| |||||||| Sbjct 448625 CTTTCGCATCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGGCTGGACTCACCTTCTCCA 448684 Query 94913 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTGGAACTTTTCAAAT 94972 |||| || ||||| |||||||| || |||||| || || || || | || | Sbjct 448685 ACGAACTCATCTCCCGTGACGAAGGTCTCCACACCGATTTCGC-ATGCCTCCTT-----T 448738 Query 94973 TATTGCGTATTAA--ACCAACGACTGAGACTA----TTCATTCTATTGTTAAGGAAGCCG 95026 | | | | | || ||| | | | || | | || | | ||| ||||||| Sbjct 448739 TCTCTCATCTCAAGCACCGCCCATCCAAACAAGCCGTCCAAGATGTCATTACCGAAGCCG 448798 Query 95027 TTGAGATTGAGAAAGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATT 95086 |||| || || ||| |||| | || || ||||| ||||| ||| | || ||||| | Sbjct 448799 TTGAAATCGAACAAGAATTCTTGACCGAGGCTCTTCCTTGCGCCCTCTTGGGCATGAACT 448858 Query 95087 CTGAAAAAATGTCTGAATATATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCGGGG 95146 || ||| |||| ||||||| || ||||| | | | | | | ||| Sbjct 448859 CTACTCTCATGAAGCAATACATTGAGTTCGTCGCTGATCG--TCTCCTCGTTGCTTTGGG 448916 Query 95147 TGCCTCCAA--TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGA 95204 | | ||| | | || || || ||||| |||||||||||||||||| | | | Sbjct 448917 TAACGACAAAGTCTACAAGTCTGCCAACCCATTCGACTTCATGGAGAACATTTCCTTGGC 448976 Query 95205 CGGGAAGACAAACTTCTTCGAAAAGAGGGTTGGGGACTA 95243 || ||||| ||||| ||||||||||| ||||| || || Sbjct 448977 TGGCAAGACCAACTTTTTCGAAAAGAGAGTTGGAGATTA 449015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583258496119840