Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq4 149 1e-30 seq1 89.7 1e-12 seq36 87.8 4e-12 >seq4 Length=2737121 Score = 149 bits (164), Expect = 1e-30 Identities = 157/205 (77%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GC 151959 |||||||| ||||| |||||||||||||| |||| | || | ||||| || || || Sbjct 1682918 TGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCGAGTTGC 1682977 Query 151960 TTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTT 152019 ||| ||||||||||| | | ||| ||||| | | |||||| ||||| ||||| || | Sbjct 1682978 TTT--CCGGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTCTTGGATCT 1683035 Query 152020 TTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCG 152079 | ||||||| | || | | |||| ||| ||| || || || || ||||||||||||| Sbjct 1683036 TGGCTTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATAGTTTTGCCCG 1683095 Query 152080 TGAGAGTCTTCACGAAGACCTGCAT 152104 |||| ||||| ||||||| |||||| Sbjct 1683096 TGAGGGTCTTGACGAAGATCTGCAT 1683120 >seq1 Length=2965994 Score = 89.7 bits (98), Expect = 1e-12 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| | ||| || ||||||||||||||||| |||| | ||| | ||||| Sbjct 1569888 AGAACCAAATGTAAAGTCGATTCTTTTTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCC 1569947 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || |||||||| | || || || | | || || || || ||| Sbjct 1569948 TCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCAGGGGGAATGCCCTCTTTGTCT 1570007 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || || || | || | | |||| || ||| || || | ||| || || Sbjct 1570008 TGAATCTTAGCCTTCACGTTGTCGATGGTGTCCGATGACTCAACCTCTAAAGTGATCGTC 1570067 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||||||||| ||||||| ||||| Sbjct 1570068 TTTCCGGTGAGAGTCTTAACGAAGATTTGCAT 1570099 >seq36 Length=569963 Score = 87.8 bits (96), Expect = 4e-12 Identities = 194/284 (68%), Gaps = 8/284 (3%) Strand=Plus/Plus Query 115629 TTCTATGCCATTTGGACATCTGATCTTTTTATGAAGCGAGTCAAGGCAAACGGAATGTGG 115688 ||||||||| | |||| ||||| | || |||||||| || | || ||| ||| Sbjct 130833 TTCTATGCCTTGTGGATTCCTGATTTGTTCATGAAGCGTGTTGAAAAGAATGGAGAATGG 130892 Query 115689 AGCCTCTTTTGT--CCCAATGAAGCCCCTGGTCTTGATGATGTTTATGGTCCAGAGTTTG 115746 | ||||| ||| ||||||||| ||||||| | | ||||||||||| ||||| | Sbjct 130893 A--CTCTTATGTGCCCCAATGAATGCCCTGGTTTGGCAGATGTTTATGGCGAGGAGTTCG 130950 Query 115747 AGAATCTTTACGAAAGGTACGAGAAAG-AGGGAAGAGCCAAAAGGGTTGTGAAGGCGCAA 115805 || ||| ||||| || || || || | ||| ||| | | || | | | ||||| ||| Sbjct 130951 AGGCTCTCTACGAGAGTTATGAAAAGGCAGGAAAGGGTCGCAA-GACTATCAAGGCTCAA 131009 Query 115806 GACCTTTGGCATCATATCCTTGTCACACAGTCAGAGGTCGGAATGCCCTTTATTGCGTAC 115865 | |||||| | ||| |||| | || | ||| ||||| || || || ||| Sbjct 131010 AAGCTTTGGTACTCTATTCTTGAGGCTCAAACCGAGACCGGAAATCCTTTCATGCTTTAC 131069 Query 115866 AAAGATGCAGTTTGTCGA-AAGAGCAATCAAAAGAATTTCGGTA 115908 ||||||||| | | | |||||||| |||||||| | |||| Sbjct 131070 AAAGATGCA-TGCAACAAGAAGAGCAACCAAAAGAACCTTGGTA 131112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153816128468036