Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1 217 3e-51 seq4 190 4e-43 seq3 156 9e-33 seq8 84.2 5e-11 >seq1 Length=2965994 Score = 217 bits (240), Expect = 3e-51 Identities = 185/228 (81%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| |||| |||||| || ||||||||||||||||||||| | Sbjct 1569872 ACCACCACGGAGACGAAGAACCAAATGTAAAGTCGATTCTTTTTGGATGTTGTAGTCGGA 1569931 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||||||||| ||||| || || |||||||| | ||||||||| ||| || Sbjct 1569932 AAGAGTGCGGCCATCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCAGGGGG 1569991 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||| |||||||| ||||| || || ||| | ||||| |||||||| | || || Sbjct 1569992 AATGCCCTCTTTGTCTTGAATCTTAGCCTTCACGTTGTCGATGGTGTCCGATGACTCAAC 1570051 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | |||||||||||| || || | |||||||||||| || ||||| Sbjct 1570052 CTCTAAAGTGATCGTCTTTCCGGTGAGAGTCTTAACGAAGATTTGCAT 1570099 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || || |||||||| ||||| |||||||| || Sbjct 1569644 ACCACCACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATGTTGTAATCCAA 1569703 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || | ||||||||| | || || ||||| |||||||| |||||||| ||| || Sbjct 1569704 AAGAGTTCTGCCATCCTCCAACTGCTTTCCGGCGAAGATCAATCGTTGTTGATCAGGTGG 1569763 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||| ||||| ||||| || || || |||| ||||| || |||| ||| || Sbjct 1569764 AATACCCTCCTTATCTTGAATCTTGGCCTTAACATTATCAATAGTATCTGAAGATTCTAC 1569823 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| ||||| || ||||| ||||| || || || ||||| Sbjct 1569824 CTCTAATGTGATGGTCTTTCCAGTCAAGGTCTTGACAAAGATTTGCAT 1569871 Score = 129 bits (142), Expect = 1e-24 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || | || |||| || | || || || || |||||||| || | Sbjct 1570100 ACCACCACGAAGTCTGAGAACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCGGA 1570159 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || |||||||| ||||| || ||||| || ||||||||||||||||| || Sbjct 1570160 GAGGGTTCGACCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGTTGTTGGTCGGGGGG 1570219 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||| ||||||||||| || || || | ||||||||||| | ||||| Sbjct 1570220 AATTCCCTCCTTATCTTGGATCTTGGCCTTGACATTGTCGATAGTGTCGCTGGACTCGAC 1570279 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 || || ||||| ||||| || || Sbjct 1570280 CTCAAGGGTGATGGTCTTTCCGGT 1570303 >seq4 Length=2737121 Score = 190 bits (210), Expect = 4e-43 Identities = 179/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || | || | || | ||| || ||||||||||||||||| | Sbjct 1682893 ACCACCACGGAGACGTAACACTAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGA 1682952 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||||||||| ||||| || ||||| |||||||| || |||||||| || Sbjct 1682953 AAGGGTGCGGCCATCCTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGG 1683012 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||||||||||||||| ||||| || | ||||| |||||||||| || || Sbjct 1683013 GATTCCCTCCTTGTCTTGGATCTTGGCTTTGACATTGTCGATGGTGTCCGAAGACTCAAC 1683072 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| || || ||||| | ||||| ||||| |||||||| Sbjct 1683073 CTCGAGGGTGATAGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 1683120 >seq3 Length=2936196 Score = 156 bits (172), Expect = 9e-33 Identities = 142/179 (79%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 |||||||||||||| || | ||| || ||||| ||||| ||||| || || || |||||| Sbjct 1398841 TTTTGGATGTTGTAATCTGAAAGAGTACGGCCGTCCTCAAGTTGCTTTCCAGCGAAGATC 1398782 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 ||||||||||| || ||||| ||||| |||||||||||||| || || || | ||| Sbjct 1398781 AAACGTTGTTGATCGGGGGGAATTCCCTCTTTGTCTTGGATCTTGGCCTTAACATTGTCG 1398722 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 |||||||| || | ||||| || || ||||| ||||| ||||| | ||||| ||||| Sbjct 1398721 ATAGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 1398663 >seq8 Length=1484259 Score = 84.2 bits (92), Expect = 5e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 316983 GTCGAGGTCATGCTCAACATATGCAGTTTTCAGAATATCCTTCGTCGGGAACCCTTCCAA 317042 |||||| || |||||||| | |||| || | | |||| | ||||| || || | Sbjct 402801 GTCGAGATCGTGCTCAACGAACACAGTCTTGACCTCACTCTTCTTTGGGAAACCCTCAAC 402742 Query 317043 CTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAG 317102 || |||| || || | ||| || || ||||| || | ||| || || |||||||| Sbjct 402741 TTGCTCGTTGTTGATAGCACGCATGAGAGTAGACTTTCCGGAACCGTTAGGACCGCAAAG 402682 Query 317103 ACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACC 317162 |||||| || | || ||| ||| | | |||| | ||| ||||||||||| |||| Sbjct 402681 ACCATATCGTTGACCACGCTTGAGACGGAGATGGGTTTGGTTGAGAAGAATCTTGGCACC 402622 Query 317163 ATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 |||||||| ||| ||| | || |||||||| || Sbjct 402621 ATATGCCAAGTTGAAGGTACAGTTGCAAAGGTCCTCACC 402583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046734962014664