Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq4 138 1e-27 seq1 98.7 9e-16 >seq4 Length=2737121 Score = 138 bits (152), Expect = 1e-27 Identities = 172/233 (74%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 ||| || || || ||||||||||| | || || ||| |||||| || ||||| ||||| Sbjct 1682890 ACCACCACCACGGAGACGTAACACTAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTC 1682949 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 ||| |||||||| | || ||||| ||||| |||||||| |||| ||||||||||| | Sbjct 1682950 GGAAAGGGTGCGGCCATCCTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGG 1683009 Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACT 41810 || | | |||||||| | || | || |||| || | | | ||||| |||| Sbjct 1683010 TGGGATTCCCTCCTTGT-CTTGGATCTTGGCTTTGACATTGTCGATGGTGTCCGAAGACT 1683068 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | ||||| | || || ||||| ||||| || ||||| ||||| ||||||||| Sbjct 1683069 CAACCTCGAGGGTGATAGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 1683121 >seq1 Length=2965994 Score = 98.7 bits (108), Expect = 9e-16 Identities = 125/170 (74%), Gaps = 4/170 (2%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||||||||| || ||||||||||| || | || || || ||||| |||||||| Sbjct 1570136 CTCCTTCTGAATGTTGTAATCGGAGAGGGTTCGACCATCCTCAAGTTGCTTTCCGGCGAA 1570195 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAAC 41788 |||| || |||||||| | ||||| | |||||| || ||| || ||| || Sbjct 1570196 AATCAAACGTTGTTGGTCGGGGGGAATTCCCTCCTTATCTTGGATCTTGGCCTTGACATT 1570255 Query 41789 GACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGT 41838 | || | ||||||||| ||||| ||||| | || || || || || || Sbjct 1570256 GTCG--ATAGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTTCCGGT 1570303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462302173899200