Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq6460 111 3e-19 seq4003 109 1e-18 >seq6460 Length=17344 Score = 111 bits (122), Expect = 3e-19 Identities = 167/233 (72%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 61089 CAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAACAGAAAGGACT 61148 ||||||||||| || ||||| |||||||| || |||| ||||||| ||||| || Sbjct 5845 CAAGCATCAACCTCGGAACTCTATGGAAAGGTAGTGGAAACCCCTCAAAGTGAAAGCACG 5786 Query 61149 CCGTTTTATCCTCGTAGCCCGTATGGTGTTGCAAAACTATACGCTTACTGGAT--TTGTA 61206 || || |||||||| || |||||||| || || |||| || |||||||| |||| Sbjct 5785 CCTTTCTATCCTCGATCTCCTTATGGTGTCGCGAAGTTATATGCGTACTGGATCGTTGTT 5726 Query 61207 AAAATTACCGCGAGTCGTATGGAATGTTTGTATGTAACTCGATTTGTTTCAATCACGAGA 61266 || |||||||||| | || || ||||||| || || || |||||||| || | Sbjct 5725 AA--TTACCGCGAGGCTTACGGCATGTTTGCCTGCAATGGCATCCTCTTCAATCATGAAA 5668 Query 61267 GTCCCAATAGAGGTCATCAGTTT-GTGACTCGTAAAATTACGAAGGCGGTTGC 61318 | || | ||||||| || ||| || || | || ||| | | ||| ||||| Sbjct 5667 GCCCTAGGAGAGGTC-GCACTTTCGTTACAAGAAAGATTTCCAGGGCCGTTGC 5616 >seq4003 Length=18687 Score = 109 bits (120), Expect = 1e-18 Identities = 131/178 (74%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 230444 GCCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCA 230503 |||| ||||| ||||| || || | ||| | ||||||||||| || || ||||| || Sbjct 14480 GCCTGATTGGAATGAATGCGAAATTGATGTGCCAGTACATCGAGTTTGTTGCCGATCGGC 14539 Query 230504 TTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGG 230563 | | ||||| | || |||| || || |||||||| | || || || | || |||| Sbjct 14540 TCCTCGTTGCTTTGGGCAACGATAAGGTTTACAACTCGACCAATCCTTTCGATTTCATGG 14599 Query 230564 AGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCA 230621 | | || ||||| ||||| ||||| ||||||||||| ||||| ||| |||||||| Sbjct 14600 ACATGATCTCGCTGCAAGGCAAGACAAACTTCTTCGAGAAGCGCGTCTCAGACTATCA 14657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057683180485700