Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq4003 246 3e-60 seq6755 111 2e-19 seq9516 98.7 1e-15 seq6550 98.7 1e-15 >seq4003 Length=18687 Score = 246 bits (272), Expect = 3e-60 Identities = 450/656 (69%), Gaps = 11/656 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| || ||||| || || |||||||| | || ||| ||||||| Sbjct 13633 ATATGGCAGATGTACAAGAAAGCCGAAGCCTCTTTCTGGACGGCAGAAGAGATGGACCTC 13692 Query 116696 TCCAAGGACACGAGCGACTGGG---AGCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || |||||| |||||| | ||| | |||||||| || ||||| ||||| Sbjct 13693 TCTAAGGACCTTCATGACTGGACCAAACGCCTCAACGACAATGAACGCCACTTCATATCA 13752 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| ||||| || || || || ||| ||||| |||||||||||||| || ||||| Sbjct 13753 CACGTTCTGGCGTTCTTTGCTGCTTCCGATGGCATTGTCAACGAGAATCTCGTAGAGCGA 13812 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 || || | ||||| || || ||||| ||||| ||||||||||| || || || ||| Sbjct 13813 TTTTCTAACGAGGTACAAGTTGCCGAAGCGCGCTGCTTCTACGGTTTCCAAATAATGATG 13872 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT---GCGCTCT-TC 116928 || ||| | || || |||| ||||| ||| ||||| || ||| | | ||| | Sbjct 13873 GAAAACATCCATTCAGAAACATATTCCCTCCTTATCGATACCTACATAAAGGATTCTCGC 13932 Query 116929 GGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988 | | ||| || | || | || ||||| || || || || |||| ||||||| Sbjct 13933 CAACGTGAATTTC----TCTTCGATGCTATCGACACTATACCCTGTATCAAGAAGAAGGC 13988 Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGC 117048 || |||||| | | |||||| | | | | | | | || | || ||| ||||||| Sbjct 13989 GGATTGGGCGTTAAGATGGATCTCTGACCAACAATCAACATTTGCTGAACGCTTGGTGGC 14048 Query 117049 CTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAA 117108 ||||| || || || ||| | ||||| || ||| || || | || || |||||||| Sbjct 14049 ATTCGCTGCAGTTGAAGGCATTTTCTTCTCTGGCTCGTTTGCGTCTATCTTCTGGCTCAA 14108 Query 117109 GAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGG 117168 |||| | || || ||||| ||| |||| ||| ||||||||||| ||| | |||||||| Sbjct 14109 GAAAAGGGGGCTTATGCCAGGCTTGACGTTCTCAAACGAGCTCATTTCCCGCGACGAGGG 14168 Query 117169 TCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGC 117228 |||| || || || || || |||||| |||||| || || || | | Sbjct 14169 CATGCACACAGATTTCGCGTGCTTATTGTTCAGCCATTTGAAGCGACGCCCTCACCCACA 14228 Query 117229 GCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCG 117284 | |||| |||| ||| || || |||| |||||||| |||||||||| Sbjct 14229 ACTTGTCAAAACGATCATCATGGAGGCTGTCGAAATCGAGCAAGAATTCCTCACCG 14284 Score = 196 bits (216), Expect = 5e-45 Identities = 386/568 (68%), Gaps = 5/568 (1%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| | |||| || |||||| | || ||||||||||| | |||||| | ||||| Sbjct 12616 ATTTGGCACTTGTATAAGAAGGCCCAAGCTTCGTTCTGGACTGCAGAGGAGATTGACCTT 12557 Query 116696 TCCAAGGA-CACGAGCGACTGG---GAGCGCTTGAACGACAACGAGCGCCATTTCATCAA 116751 || | || | || || ||| || ||||| || | |||| ||| ||||| | Sbjct 12556 TCTCACGATCTCGTA-GATTGGTCTGAACGCTTAAATGCGGACGAACGCTATTTCCTATC 12498 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 | || ||||| ||||| || || ||| ||||| |||||||| |||||||| || || Sbjct 12497 TCGAGTCCTGGCTTTTTTTGCAGCATCCGATGGCATTGTCAACGAAAATCTGGTAGAACG 12438 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| | || || || | ||||| || || |||||||| || || || || || Sbjct 12437 ATTCTCATGTGAAGTCCAAATAGCCGAAGCACGATGCTTCTATGGATTCCAAATTATGAT 12378 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGA 116931 ||| || ||||||||||||| ||||| | || ||||| ||| | | || | Sbjct 12377 GGAAAATGTGCACTCGGAAACCTATTCTCTTTTAATTGACACCTACATTAAGGATCCGCA 12318 Query 116932 GGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGA 116991 || || | | ||||| | ||| || || | || || || ||||| |||||| || Sbjct 12317 AGAAAAACAATGCTTGTTTACCGCTATGGATTCTATACCATGTATCAAAAGGAAGGCAGA 12258 Query 116992 GTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTT 117051 ||||| ||||| ||||| | | |||||| | |||| | ||| | || || || || Sbjct 12257 TTGGGCACTGCGATGGATATCTGATAGAGAGTCAACCTTTGCGGAGAGACTCGTCGCTTT 12198 Query 117052 CGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAA 117111 ||| || || ||||| | |||||||| || || || | || || ||| ||||||| Sbjct 12197 CGCTGCTGTTGAGGGTATTTTCTTTTCTGGATCATTTGCGTCAATTTTCTGGATCAAGAA 12138 Query 117112 ACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCT 117171 | |||||||||||||| |||| | ||| ||| | || | | |||||||| | Sbjct 12137 GAGGGGCCTCATGCCCGGTTTGACCTATTCCAATGAGTTGATAAGCCGTGACGAGGGGTT 12078 Query 117172 GCATTGCGACTTTGCCTGTTTGCTGTTC 117199 ||| ||| || || ||| |||| ||| Sbjct 12077 GCACACCGATTTCGCTTGTCTGCTCTTC 12050 >seq6755 Length=30522 Score = 111 bits (122), Expect = 2e-19 Identities = 100/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 40795 ATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACC 40854 ||||| | |||||||| || || |||| ||| ||||| |||||||| |||| |||||| Sbjct 24958 ATCCCACCCGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGACGGCCGCACC 24899 Query 40855 CTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGC 40914 |||||||||||||||||||| |||||| | || || || ||||| | ||| | | || Sbjct 24898 CTCAACGACTACAACATCCAAAAGGAGTCAACCCTCCACCTAGTTCTTCGCCTCCGTGGT 24839 Query 40915 GGCGGC 40920 |||||| Sbjct 24838 GGCGGC 24833 >seq9516 Length=56271 Score = 98.7 bits (108), Expect = 1e-15 Identities = 148/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || || || || || || || || || || || ||| | || || || | | Sbjct 47898 AATGCAGATTTTTGTCAAGACACTGACCGGAAAGACGATTACCCTTGAGGTGGAGTCTTC 47839 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | | | |||| |||||| || |||| ||||| |||||||| || | |||| Sbjct 47838 GGACACCATTGACAACG-TCAAGGCGAAGATTCAGGACAAGGAGGGCATTCCTCCCGACC 47780 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| || || || | || ||||| || || || || | ||||| ||| ||||||| Sbjct 47779 AGCAGCGTCTAATTTTTGCTGGCAAGCAACTCGAAGATGGCCGCACGCTCTCTGACTACA 47720 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCT 40895 |||||||||| ||| |||| |||| || Sbjct 47719 ACATCCAGAAAGAGAGCACGTTGCACCT 47692 >seq6550 Length=14069 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || || || ||||| || || | || || ||| || | Sbjct 9882 ATGCAGATCTTCGTTAAAACCCTGACAGGAAAAACGATAACTCTTGAGGTTGAATCCTCA 9941 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||| | || || | || || || ||||| || |||||||| Sbjct 9942 GACACGATCGATAATGTCAAAGCGAAGATACAGGATAAGGAAGGCATTCCTCCGGACCAG 10001 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || |||||||| | || ||||| ||| |||| || | |||||||| || |||||| Sbjct 10002 CAGCGACTCATTTTTGCTGGCAAGCAGTTGGAGGATGGACGCACCCTTTCTGATTACAAC 10061 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||| ||| | || || || || || Sbjct 10062 ATCCAGAAAGAGTCTACTCTTCACCTCGT 10090 Score = 86.0 bits (94), Expect = 6e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| |||||||| || || || |||||||| | || |||||| | | Sbjct 9156 ATGCAGATTTTCGTCAAAACGCTGACAGGGAAGACCATCACGCTAGAAGTCGAATCTTCT 9215 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| || |||| || || || || || || | || ||| Sbjct 9216 GACACCATTGACAATGTCAAGGCGAAGATTCAGGATAAGGAAGGGATACCACCTGATCAG 9275 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| || || |||||||| || || | ||||| || ||||||||| Sbjct 9276 CAGCGTCTGATCTTTGCTGGGAAACAGCTAGAGGATGGTCGCACTCTTTCAGACTACAAC 9335 Query 40870 AT 40871 || Sbjct 9336 AT 9337 Score = 82.4 bits (90), Expect = 8e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 40795 ATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACC 40854 ||||| | |||||||| ||| | |||| ||| ||||||||||| || || | || || Sbjct 9547 ATCCCTCCTGACCAGCAGCGATTGATCTTCGCCGGCAAACAGCTCGAGGATGGCCGTACT 9488 Query 40855 CTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGC 40914 || || || ||||| ||||||||| | || ||||| || ||||||||| | | ||| Sbjct 9487 CTTTCGGATTATAACATTCAGAAGGAGTCTACTCTGCACCTTGTGTTGCGCCTACGAGGC 9428 Query 40915 GGC 40917 ||| Sbjct 9427 GGC 9425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515152285906400