Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq9516 102 1e-16 seq6550 102 1e-16 >seq9516 Length=56271 Score = 102 bits (112), Expect = 1e-16 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 |||| |||| | || || |||| || |||||||||||| | || |||||||| || ||| Sbjct 48041 AAAACTCAATAGAACGATAGTATCCCCCCTGATCAACAACGTCTCATTTTTGCCGGCAAA 47982 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 ||| | || ||| ||||||| | ||||||||||| ||||| || |||||| | ||| Sbjct 47981 CAACTTGAAGATGGTCGAACTCTCTCGGATTATAATATCCAAAAGGAGTCAACTCTTCAT 47922 Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT 124768 | || |||||| | || || || || Sbjct 47921 CTTGTCTTACGTCTTCGTGGAGGAAT 47896 >seq6550 Length=14069 Score = 102 bits (112), Expect = 1e-16 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| || || ||||| || || || | ||| | || | | Sbjct 8928 ATGCAAATTTTTGTGAAGACGCTTACGGGCAAGACCATCACGCTGGAGGTGGAGTCTTCT 8987 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || ||| | || ||||||||| || ||||||||||| ||||| || || Sbjct 8988 GACACCATCGACAATGTGAAGGCGAAAATTCAGGACAAAGAAGGTATCCCACCGGACCAG 9047 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | || || ||||| ||||||||| | || ||| |||| || | ||||| ||| Sbjct 9048 CAGCGCCTCATCTTTGCTGGAAAACAACTGGAAGATGGTCGTACCCTGTCGGATTACAAT 9107 Query 124719 ATTCAAAAAGAATCAACTTTGCAT 124742 ||||| || ||||| ||| | ||| Sbjct 9108 ATTCAGAAGGAATCCACTCTCCAT 9131 Score = 89.7 bits (98), Expect = 8e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 124622 GAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAA 124681 ||| ||||| ||||| ||||| |||||||||||||| || | || || ||||| || || Sbjct 9737 GAAGATTCAGGATAAGGAAGGGATACCACCTGATCAGCAGCGTCTGATCTTTGCTGGGAA 9796 Query 124682 ACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCA 124741 ||| |||||||| |||| || | ||| || || ||||| || ||||| || | || Sbjct 9797 ACAGCTAGAGGATGGTCGCACTCTTTCAGACTACAACATTCAGAAGGAATCTACCCTCCA 9856 Query 124742 TTTGGTTTTACGTTTACGAGGTGGTAT 124768 | || | |||||||| || || || Sbjct 9857 CCTCGTCCTTCGTTTACGTGGCGGCAT 9883 Score = 84.2 bits (92), Expect = 3e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | || || || ||||| || || || || |||| | ||| | | Sbjct 9156 ATGCAGATTTTCGTCAAAACGCTGACAGGGAAGACCATCACGCTAGAAGTCGAATCTTCT 9215 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | || ||| ||||| ||||| ||||| |||||||||||||| Sbjct 9216 GACACCATTGACAATGTCAAGGCGAAGATTCAGGATAAGGAAGGGATACCACCTGATCAG 9275 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAAC 124702 || | || || ||||| || ||||| |||||||| |||| || Sbjct 9276 CAGCGTCTGATCTTTGCTGGGAAACAGCTAGAGGATGGTCGCAC 9319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755357885152000