Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq9516 122 8e-23 seq6550 113 4e-20 >seq9516 Length=56271 Score = 122 bits (134), Expect = 8e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 |||||| || |||||||| || | ||||| ||| ||||| || || ||||| | Sbjct 47706 CTCTTTCTGGATGTTGTAGTCAGAGAGCGTGCGGCCATCTTCGAGTTGCTTGCCAGCAAA 47765 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 || ||||||||||| |||||||| |||||||||||||| ||| || || || | Sbjct 47766 AATTAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTT 47825 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 || | |||||||| ||| ||||| | ||| | ||| || |||||||| || || || Sbjct 47826 GTCAATGGTGTCCGAAGACTCCACCTCAAGGGTAATCGTCTTTCCGGTCAGTGTCTTGAC 47885 Query 118727 AAAAATCTGCAT 118738 |||||||||||| Sbjct 47886 AAAAATCTGCAT 47897 >seq6550 Length=14069 Score = 113 bits (124), Expect = 4e-20 Identities = 146/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 ||||||||||| || ||||||||||| | ||||| |||||| | ||| || ||| Sbjct 10078 GTAGACTCTTTCTGGATGTTGTAATCAGAAAGGGTGCGTCCATCCTCCAACTGCTTGCCA 10019 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGTTT 118660 || | ||||| |||||||| || ||||| ||||| ||||| | |||| || || ||| Sbjct 10018 GCAAAAATGAGTCGCTGCTGGTCCGGAGGAATGCCTTCCTTATCCTGT-ATCTTCGCTTT 9960 Query 118661 AACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720 || | |||| ||||| | | || ||||| | || | |||||| || ||||| || Sbjct 9959 GACATTATCGATCGTGTCTGAGGATTCAACCTCAAGAGTTATCGTTTTTCCTGTCAGGGT 9900 Query 118721 TTTTACAAAAATCTGCATG 118739 ||| || || ||||||||| Sbjct 9899 TTTAACGAAGATCTGCATG 9881 Score = 98.7 bits (108), Expect = 9e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || || || || ||||| |||||||| || || || ||| || || ||| Sbjct 9130 TGGAGAGTGGATTCCTTCTGAATATTGTAATCCGACAGGGTACGACCATCTTCCAGTTGT 9071 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 |||||||| ||||||| |||||||| || || || || || || ||||| |||||| Sbjct 9070 TTTCCAGCAAAGATGAGGCGCTGCTGGTCCGGTGGGATACCTTCTTTGTCCTGAATTTTC 9011 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 || || | |||| |||||| | ||| ||||| | || | || ||||| || Sbjct 9010 GCCTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCCAGCGTGATGGTCTTGCCCGTA 8951 Query 118716 AGAGTTTTTACAAAAATCTGCATG 118739 || || || |||||||| |||||| Sbjct 8950 AGCGTCTTCACAAAAATTTGCATG 8927 Score = 98.7 bits (108), Expect = 9e-16 Identities = 132/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 118555 GAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGAC 118614 |||||||||| || | |||||| |||||| |||||||| ||||| |||| |||| Sbjct 9339 GAATGTTGTAGTCTGAAAGAGTGCGACCATCCTCTAGCTGTTTCCCAGCAAAGATCAGAC 9280 Query 118615 GCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGG 118674 |||||||||| || ||||| || ||||| || ||| || || || | || | || Sbjct 9279 GCTGCTGATCAGGTGGTATCCCTTCCTTATCCTGAATCTTCGCCTTGACATTGTCAATGG 9220 Query 118675 TGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCT 118734 |||| | ||||| || | || | || || || ||||| ||||| || ||||||| Sbjct 9219 TGTCAGAAGATTCGACTTCTAGCGTGATGGTCTTCCCTGTCAGCGTTTTGACGAAAATCT 9160 Query 118735 GCAT 118738 |||| Sbjct 9159 GCAT 9156 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || || ||||| | | || | ||||| ||||| || || ||||||||||| || Sbjct 9880 CCGCCACGTAAACGAAGGACGAGGTGGAGGGTAGATTCCTTCTGAATGTTGTAGTCTGAA 9821 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | |||||| |||||| |||||||| ||||| |||| |||||||||||||| || ||| Sbjct 9820 AGAGTGCGACCATCCTCTAGCTGTTTCCCAGCAAAGATCAGACGCTGCTGATCAGGTGGT 9761 Query 118632 ATGCCCTCCTTGTC 118645 || || ||||| || Sbjct 9760 ATCCCTTCCTTATC 9747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433775464869880