Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq4003 152 5e-32 >seq4003 Length=18687 Score = 152 bits (168), Expect = 5e-32 Identities = 293/432 (68%), Gaps = 0/432 (0%) Strand=Plus/Plus Query 16234 ACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAG 16293 |||||| ||||| ||||| || ||||| | ||||| ||||| || ||| | || | Sbjct 12059 ACAAGCGAAATCGGTGTGCAACCCCTCGTCACGGCTTATCAACTCATTGGAATAGGTCAA 12118 Query 16294 ACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAA 16353 ||| ||||| || || | || || ||||| || || | |||||||| ||||||||||| Sbjct 12119 ACCGGGCATGAGGCCCCTCTTCTTGATCCAGAAAATTGACGCAAATGATCCAGAAAAGAA 12178 Query 16354 TATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttc 16413 ||||| ||||| || || || || || | || ||| | | ||| | | || Sbjct 12179 AATACCCTCAACAGCAGCGAAAGCGACGAGTCTCTCCGCAAAGGTTGACTCTCTATCAGA 12238 Query 16414 tatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATT 16473 ||||||| ||||||| ||| || ||| | ||| || || || || | Sbjct 12239 TATCCATCGCAGTGCCCAATCTGCCTTCCTTTTGATACATGGTATAGAATCCATAGCGGT 12298 Query 16474 AAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACAT 16533 ||| || | | |||||||| ||| ||| || || || |||| | | ||| | Sbjct 12299 AAACAAGCATTGTTTTTCTTGCGGATCCTTAATGTAGGTGTCAATTAAAAGAGAATAGGT 12358 Query 16534 TTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATAT 16593 ||| || || | ||| ||||| || || || ||||| ||||||| ||||||| ||| Sbjct 12359 TTCCGAGTGCACATTTTCCATCATAATTTGGAATCCATAGAAGCATCGTGCTTCGGCTAT 12418 Query 16594 TTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGC 16653 ||| |||||| | | || | |||| | | |||||||| || || |||||| ||||| Sbjct 12419 TTGGACTTCACATGAGAATCGTTCTACCAGATTTTCGTTGACAATGCCATCGGATGCTGC 12478 Query 16654 AAAAAACGCAAG 16665 |||||| || || Sbjct 12479 AAAAAAAGCCAG 12490 Score = 136 bits (150), Expect = 4e-27 Identities = 346/520 (67%), Gaps = 11/520 (2%) Strand=Plus/Minus Query 16276 CTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGC 16335 ||||||||| || || | |||||||| || || | ||| || | ||| || |||| || Sbjct 14148 CTCGTTTGAGAACGTCAAGCCTGGCATAAGCCCCCTTTTCTTGAGCCAGAAGATAGACGC 14089 Query 16336 AAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTA 16395 ||| || ||||| ||||| || ||||||||||| || ||||| ||||| || ||| | | Sbjct 14088 AAACGAGCCAGAGAAGAAAATGCCTTCAACTGCAGCGAATGCCACCAAGCGTTCAGCAAA 14029 Query 16396 CGTTCTAtttttact-ttctatccattttttagcccaatttgctttttgtttAACACAGT 16454 ||| ||| || | |||||| || ||||||| || || | || | |||| Sbjct 14028 TGTT-GATTGTTGGTCAGAGATCCATCTTAACGCCCAATCCGCCTTCTTCTTGATACAGG 13970 Query 16455 TCATGTTCTCTATTGCATTAAATAAATAAtttttttCTTTGC---TATCTAAAATATAAG 16511 || | || || |||| || | | | || || || ||| || || | Sbjct 13969 GTATAGTGTCGATAGCATCGAAGAGAAA---TTCACGTTGGCGAGAATCCTTTATGTAGG 13913 Query 16512 TATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCAT 16571 |||| || || | ||| |||||||||| || || ||||| ||| || ||||| | Sbjct 13912 TATCGATAAGGAGGGAATATGTTTCTGAATGGATGTTTTCCATCATTATTTGGAAACCGT 13853 Query 16572 AAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGT 16631 | ||||| | ||||||| | |||||| || |||| | ||| | | || |||| Sbjct 13852 AGAAGCAGCGCGCTTCGGCAACTTGTACCTCGTTAGAAAATCGCTCTACGAGATTCTCGT 13793 Query 16632 TAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGT 16691 | || || |||||| ||| ||||| ||||| || | |||| || || | ||| | Sbjct 13792 TGACAATGCCATCGGAAGCAGCAAAGAACGCCAGAACGTGTGATATGAAGTGGCGTTCAT 13733 Query 16692 TATC--TGA-AAGTTTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAG 16748 | || ||| |||| ||||||| || || || || | || | ||||||| | | Sbjct 13732 TGTCGTTGAGGCGTTTGGTCCAGTCATGAAGGTCCTTAGAGAGGTCCATCTCTTCTGCCG 13673 Query 16749 TCCAAAAAGAAGCAACAGCCTTTTTATACATTTTCCATAT 16788 |||| ||||| || | || || || ||||| | |||||| Sbjct 13672 TCCAGAAAGAGGCTTCGGCTTTCTTGTACATCTGCCATAT 13633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462451931254000