Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq9516 129 5e-25 seq6550 116 3e-21 >seq9516 Length=56271 Score = 129 bits (142), Expect = 5e-25 Identities = 156/211 (74%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 45127 TACCAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGT 45185 ||||||| |||| ||||||||| ||||| ||||||||||| || ||| | || | Sbjct 47687 TACCAAGGTGCAACGTGCTCTCTTTCTGGATGTTGTAGTCAGAGAGCGTGCGGCCATCTT 47746 Query 45186 CCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCG 45245 | ||||| || || || || || | ||||| ||||||||||| | |||||||||||| Sbjct 47747 CGAGTTGCTTGCCAGCAAAAATTAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCT 47806 Query 45246 CAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCT 45305 ||| || ||| || | | | ||||| | ||||||||| | ||||||||||| Sbjct 47807 GAATCTTCGCCTTGACGTTGTCAATGGTGTCCGAAGACTCCACCTCAAGGGTAATCGTCT 47866 Query 45306 TGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | || ||||| ||||| ||||| || ||||| Sbjct 47867 TTCCGGTCAGTGTCTTGACAAAAATCTGCAT 47897 >seq6550 Length=14069 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 ||||||||||| ||||| || ||| ||| | || |||||||||||||| || || Sbjct 9118 TCCTTCTGAATATTGTAATCCGACAGGGTACGACCATCTTCCAGTTGTTTTCCAGCAAAG 9059 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 || | ||||| ||||| || || | ||| || |||||| |||||| ||| || Sbjct 9058 ATGAGGCGCTGCTGGTCCGGTGGGATACCTTCTTTGTCCTGAATTTTCGCCTTCACATTG 8999 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | |||| | ||||||||||| || || ||||||||||| || ||||||||| Sbjct 8998 TCGATGGTGTCAGAAGACTCCACCTCCAGCGTGATGGTCTTGCCCGTAAGCGTCTTCACA 8939 Query 45326 AAGATTTGCATG 45337 || ||||||||| Sbjct 8938 AAAATTTGCATG 8927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395025172368190