Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq4003 138 1e-27 >seq4003 Length=18687 Score = 138 bits (152), Expect = 1e-27 Identities = 372/564 (66%), Gaps = 9/564 (2%) Strand=Plus/Minus Query 14200 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 14259 ||| ||||| ||||| || | |||||| || | ||| || |||||||| || || Sbjct 14193 TAAGCACGCGAAATCTGTGTGCATGCCCTCGTCGCGGGAAATGAGCTCGTTTGAGAACGT 14134 Query 14260 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAA 14319 || |||||||| | || | ||| || | ||| || || | || || || || || || Sbjct 14133 CAAGCCTGGCATAAGCCCCCTTTTCTTGAGCCAGAAGATAGACGCAAACGAGCCAGAGAA 14074 Query 14320 GAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTT 14379 ||| || || ||||||||||| || || | || ||||| |||| | || || || || Sbjct 14073 GAAAATGCCTTCAACTGCAGCGAATGCCACCAAGCGTTCAGCAAATGTTGATTGTTGGTC 14014 Query 14380 CGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGC 14439 || |||||| || ||||| || | || || || ||| | || || || ||||| Sbjct 14013 AGAGATCCATCTTAACGCCCAATCCGCCTTCTTCTTGATACAGGGTATAGTGTCGATAGC 13954 Query 14440 AT--TAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA 14497 || | | |||| | || | | | ||| ||||| ||||| ||||| | | | Sbjct 13953 ATCGAAGAGAAATTCACGTTGGCGAGAATCCTT--TATGTAGGTATCGATAAGGAGGGAA 13896 Query 14498 TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCT 14557 || |||| || || ||||||||||| ||| || ||||| || || || | ||||| Sbjct 13895 TATGTTTCTGAATGGATGTTTTCCATCATTATTTGGAAACCGTAGAAGCAGCGCGCTTCG 13836 Query 14558 GACCATTGTACCTC-TGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACT 14616 | ||||||||| | || |||||| || | | ||| || || || || ||||| Sbjct 13835 GCAACTTGTACCTCGTTAG-AAAATCGCTCTACGAGATTCTCGTTGACAATGCCATCGGA 13777 Query 14617 AGCTGCAAAAAATGCCAATATGTTTTTAATAAAGT---ATTGCTCTTCATTGCTGAGTTT 14673 ||| ||||| || |||| | || | || |||| || | || ||| | |||| Sbjct 13776 AGCAGCAAAGAACGCCAGAACGTGTGATATGAAGTGGCGTTCATTGTCGTTGAGGCGTTT 13717 Query 14674 TTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAAC 14733 |||| || | |||||||| || || | || || | ||||| ||| || | Sbjct 13716 GGTCCAGTCATGAAGGTCCTTAGAGAGGTCCATCTCTTCTGCCGTCCAGAAAGAGGCTTC 13657 Query 14734 AGCTTTTTTATACATTACCCATAT 14757 ||||| || ||||| |||||| Sbjct 13656 GGCTTTCTTGTACATCTGCCATAT 13633 Score = 100 bits (110), Expect = 3e-16 Identities = 270/411 (66%), Gaps = 4/411 (1%) Strand=Plus/Plus Query 14225 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 14284 ||||| || | || || | || || ||| | || || || ||||| | || | || Sbjct 12081 CCCTCGTCACGGCTTATCAACTCATTGGAATAGGTCAAACCGGGCATGAGGCCCCTCTTC 12140 Query 14285 tttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAAC 14344 || | ||| || |||| || |||||||| |||||||| || |||||||| ||||| || Sbjct 12141 TTGATCCAGAAAATTGACGCAAATGATCCAGAAAAGAAAATACCCTCAACAGCAGCGAAA 12200 Query 14345 GCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCA 14404 || | | || || |||| | || | | | | ||||||||| ||||| || Sbjct 12201 GCGACGAGTCTCTCCGCAAAGGTTGACTCTCTATCAGATATCCATCGCAGTGCCCAATCT 12260 Query 14405 GAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTCCTTCTCTTTA 14464 | || |||| ||| | || | || ||||| |||| || || || |||| Sbjct 12261 GCCTTCCTTTTGATACATGGTATAGAATCCATAGCGGTAAACAAGCATTGTTTTTCTTGC 12320 Query 14465 GTA--CTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCA 14522 | | ||| |||||| || ||||| | | ||| |||| ||||| | ||||||| Sbjct 12321 GGATCCTT--AATGTAGGTGTCAATTAAAAGAGAATAGGTTTCCGAGTGCACATTTTCCA 12378 Query 14523 TAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATC 14582 | || || || ||||| || |||| ||||| | ||| || || | | |||| Sbjct 12379 TCATAATTTGGAATCCATAGAAGCATCGTGCTTCGGCTATTTGGACTTCACATGAGAATC 12438 Query 14583 TTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCA 14633 ||| ||| |||||| || || || ||||| ||||||||||| |||| Sbjct 12439 GTTCTACCAGATTTTCGTTGACAATGCCATCGGATGCTGCAAAAAAAGCCA 12489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482282955365200