Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq9433 86.0 1e-11 seq4003 86.0 1e-11 seq606 86.0 1e-11 >seq9433 Length=11862 Score = 86.0 bits (94), Expect = 1e-11 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 94831 GTATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGT 94890 || ||||| || ||||| || || |||| | || | ||||||||| || ||| Sbjct 2787 GTGTCATAGATGCCCTCGATCGAGTCTTCTTTCATGCAAACAAGGAAGCATGAACTGAGT 2846 Query 94891 TGGGG-TGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCT 94949 || || | || | ||||| ||| || | ||||| || ||||| ||||| || || Sbjct 2847 TGAGGATTTGGC-GTTCCGGCATTGAATAAGGTGGGAGATGCATGAGTAAAGTAACGCTC 2905 Query 94950 CGACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGC 95009 |||||||||| ||| || || || ||| | ||| || || ||||| ||||| || Sbjct 2906 GGACATGAGATTATAAGTCTCGATAACACGATCGATATCACTCCCATGAATACCGACGGC 2965 Query 95010 CACACGCATAATCATGTCCTGAGGGCGCTCA 95040 || ||||||||||| | ||| || |||||| Sbjct 2966 GACCCGCATAATCATATGCTGTGGTCGCTCA 2996 >seq4003 Length=18687 Score = 86.0 bits (94), Expect = 1e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || || || ||||| ||||| || || |||||| ||| |||| || || ||||||||| Sbjct 12205 GTCGCTTTCGCTGCTGTTGAGGGTATTTTCTTTTCTGGATCATTTGCGTCAATTTTCTGG 12146 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027 |||||||| ||||| | |||| ||| | |||| ||||||||||| || Sbjct 12145 ATCAAGAAGAGGGGCCTCATGCCCGGTTTGACCTATTCCAATGAGTTGAT 12096 Score = 86.0 bits (94), Expect = 1e-11 Identities = 137/195 (70%), Gaps = 5/195 (3%) Strand=Plus/Plus Query 101852 ATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGAT----GCAAAGCAATAACGATTTGGC 101907 ||||||||||||| | | ||||| | | ||||| | | |||| | ||||| | Sbjct 13975 ATCAAGAAGAAGGCGGATTGGGCGTTAAGATGGATCTCTGACCAACAATCAACATTTG-C 14033 Query 101908 GGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATC 101967 |||| | || || || |||||||||||||| || ||||| ||| | || || || Sbjct 14034 TGAACGCTTGGTGGCATTCGCTGCAGTTGAAGGCATTTTCTTCTCTGGCTCGTTTGCGTC 14093 Query 101968 CATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027 || |||||| ||||||| ||||| || |||| || | || | ||| || ||| |||| Sbjct 14094 TATCTTCTGGCTCAAGAAAAGGGGGCTTATGCCAGGCTTGACGTTCTCAAACGAGCTCAT 14153 Query 102028 TTCTAGGGACGAAGG 102042 ||| | ||||| || Sbjct 14154 TTCCCGCGACGAGGG 14168 >seq606 Length=6196 Score = 86.0 bits (94), Expect = 1e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 35393 GAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGAT 35452 || || |||||||||||||| || |||||||| ||| | |||||||| || ||||||| Sbjct 6063 GAAGGGGATTTGGGACCCGTGTATGGATTCCAGTGGAGACATTTTGGAGCAGAATATGTC 6122 Query 35453 ACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTG 35494 |||| | | |||||| | || |||||| ||||||| ||| Sbjct 6123 GGCTGTGATGCGGATTATGCGGGGAAGGGTGTTGATCAGTTG 6164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989452264722450