Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq4003 141 9e-29 >seq4003 Length=18687 Score = 141 bits (156), Expect = 9e-29 Identities = 297/437 (68%), Gaps = 13/437 (3%) Strand=Plus/Plus Query 11629 ACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAA 11688 ||| || ||||| || || || ||||| | ||||| | ||||| ||| | || || Sbjct 12059 ACAAGCGAAATCGGTGTGCAACCCCTCGTCACGGCTTATCAACTCATTGGAATAGGTCAA 12118 Query 11689 TCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAA 11748 |||||||| | || | || || ||||| || || | |||||||| ||||||||||| Sbjct 12119 ACCGGGCATGAGGCCCCTCTTCTTGATCCAGAAAATTGACGCAAATGATCCAGAAAAGAA 12178 Query 11749 TATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATACCTTGTTGCT-----A 11803 || ||||| ||||| || || || || | || ||||| | | ||| || | Sbjct 12179 AATACCCTCAACAGCAGCGAAAGCGACGAGTC--TCTCCGCAAAGGTTGACTCTCTATCA 12236 Query 11804 GATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCG 11863 ||||||||| |||||||| || ||| |||| | ||| || | || |||||| Sbjct 12237 GATATCCATCGCAGTGCCCAATCTGCCTTCCTTTTGATACATGGTATAGAATCCATAGCG 12296 Query 11864 TTAAATAAATGCAT--TTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTAT 11921 |||| || |||| ||||||| ||| | | || || || ||||| | | || Sbjct 12297 GTAAACAA--GCATTGTTTTTCTTGCGGATCCTTAATGTAGGTGTCAATTAAAAGAGAAT 12354 Query 11922 ACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTG 11981 | |||| || || | ||||||||| ||||| ||||||||||| |||||||| || | Sbjct 12355 AGGTTTCCGAGTGCACATTTTCCATCATAATTTGGAATCCATAGAAGCATCGTGCTTCGG 12414 Query 11982 AACACTGTACATCCACAT-AAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTA 12040 || || | ||||| | |||| ||| | | ||| || || ||||| ||||| Sbjct 12415 CTATTTGGAC-TTCACATGAGAATCGTTCTACCAGATTTTCGTTGACAATGCCATCGGAT 12473 Query 12041 GATGCAAAAAATGCTAG 12057 | ||||||||| || || Sbjct 12474 GCTGCAAAAAAAGCCAG 12490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468463950341600