Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq6550 95.1 1e-14 seq9516 89.7 5e-13 seq4003 89.7 5e-13 >seq6550 Length=14069 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 |||||| || | ||| | ||| | ||||| ||||||||||| || ||||| ||||| Sbjct 10109 GCCGCCACGAAGACGAAGAACGAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGA 10050 Query 139597 CATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 | |||| || | || || | ||| || |||||| | || || || ||||| || |||| Sbjct 10049 AAGGGTGCGTCCA-TCCTCCAACTGCTTGCCAGCAAAAATGAGTCGCTGCTGGTCCGGAG 9991 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 | |||||||| || || || || ||| | | || | ||||| | || || | Sbjct 9990 GAATGCCTTCCTTATCCTGTATCTTCGCTTTGACATTATCGATCGTGTCTGAGGATTCAA 9931 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||| || | ||| || || |||| ||||| ||||| || ||||| Sbjct 9930 CCTCAAGAGTTATCGTTTTTCCTGTCAGGGTTTTAACGAAGATCTGCAT 9882 >seq9516 Length=56271 Score = 89.7 bits (98), Expect = 5e-13 Identities = 115/156 (74%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 |||||||| || || |||||| | || ||||| ||||| |||||||| ||||| || ||| Sbjct 47743 TCTTCGAGTTGCTTGCCAGCAAAAATTAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTG 47802 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTG-TGTCGGTGGGCTCCACCTCAACGGTCAC 139728 || ||| | || | || | | || || |||| | | ||||||||||| ||| | Sbjct 47803 TCC-TGAATCTTCGCCTTGACGTTGTCAATGGTGTCCGAAGACTCCACCTCAAGGGTAAT 47861 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||| ||||||| || || || || || ||||| Sbjct 47862 CGTCTTTCCGGTCAGTGTCTTGACAAAAATCTGCAT 47897 >seq4003 Length=18687 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 52564 AAAAAGGATGATTGGGCATTGAAATGGATCGAAAACGACAAAGCCACTTTTGCCGAACGT 52623 || |||| |||||||| || | ||||||| || | || | || ||||| ||||| Sbjct 13981 AAGAAGGCGGATTGGGCGTTAAGATGGATCTCTGACCAACAATCAACATTTGCTGAACGC 14040 Query 52624 CTGGTCGCGTTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGTTTTGCGGCAATATTT 52683 |||| || || ||| ||| ||||| | || || || || |||||| | || || Sbjct 14041 TTGGTGGCATTCGCTGCAGTTGAAGGCATTTTCTTCTCTGGCTCGTTTGCGTCTATCTTC 14100 Query 52684 TACATCAAAACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATATCGCGC 52743 | |||| | ||| | ||||| ||| | ||||| |||||| | || || ||| Sbjct 14101 TGGCTCAAGAAAAGGGGGCTTATGCCAGGCTTGACGTTCTCAAACGAGCTCATTTCCCGC 14160 Query 52744 GACGAAGGAATGCACACAGATTTTGCGTGTTT 52775 ||||| || |||||||||||||| ||||| || Sbjct 14161 GACGAGGGCATGCACACAGATTTCGCGTGCTT 14192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495999573688000