Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq4003 150 2e-31 >seq4003 Length=18687 Score = 150 bits (166), Expect = 2e-31 Identities = 375/565 (66%), Gaps = 11/565 (2%) Strand=Plus/Minus Query 13868 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 13927 ||| ||||| ||||| || | |||||| || | ||| || |||||||| || || Sbjct 14193 TAAGCACGCGAAATCTGTGTGCATGCCCTCGTCGCGGGAAATGAGCTCGTTTGAGAACGT 14134 Query 13928 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAA 13987 || |||||||| | || | ||| || | ||| || || | ||||| || || || || Sbjct 14133 CAAGCCTGGCATAAGCCCCCTTTTCTTGAGCCAGAAGATAGACGCAAACGAGCCAGAGAA 14074 Query 13988 GAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTT 14047 ||| || || ||||||||||| || || | || ||||| |||| | || || || || Sbjct 14073 GAAAATGCCTTCAACTGCAGCGAATGCCACCAAGCGTTCAGCAAATGTTGATTGTTGGTC 14014 Query 14048 CGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGC 14107 || |||||| || ||||| || | || || || ||| | || || || ||||| Sbjct 14013 AGAGATCCATCTTAACGCCCAATCCGCCTTCTTCTTGATACAGGGTATAGTGTCGATAGC 13954 Query 14108 ATTAAATAAATATT--CCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA 14165 || || | | ||| | || | | | ||| ||||| ||||| ||||| | | | Sbjct 13953 ATCGAAGAGAAATTCACGTTGGCGAGAATCCTT--TATGTAGGTATCGATAAGGAGGGAA 13896 Query 14166 TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCC 14225 || |||| || || ||||||||||| ||| || ||||| || ||||| | ||||| Sbjct 13895 TATGTTTCTGAATGGATGTTTTCCATCATTATTTGGAAACCGTAGAAGCAGCGCGCTTCG 13836 Query 14226 GACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTA 14285 | |||||| || |||||| || | | ||| || || || || ||||| | Sbjct 13835 GCAACTTGTACCTCGTTAGAAAATCGCTCTACGAGATTCTCGTTGACAATGCCATCGGAA 13776 Query 14286 GCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGA---GTTTT 14342 || ||||| || |||| | || | || |||| | || | | ||||| |||| Sbjct 13775 GCAGCAAAGAACGCCAGAACGTGTGATATGAAGTGGCGTTCATTGTCGTTGAGGCGTTTG 13716 Query 14343 TTCCAATCGGATAAA--TCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGA 14400 |||| || || || |||||||| || || | || || | ||||| ||| || Sbjct 13715 GTCCAGTC--ATGAAGGTCCTTAGAGAGGTCCATCTCTTCTGCCGTCCAGAAAGAGGCTT 13658 Query 14401 CAGCTTTTTTATACATTACCCATAT 14425 | ||||| || ||||| |||||| Sbjct 13657 CGGCTTTCTTGTACATCTGCCATAT 13633 Score = 114 bits (126), Expect = 1e-20 Identities = 273/411 (66%), Gaps = 4/411 (1%) Strand=Plus/Plus Query 13893 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13952 ||||| || | || || | || || ||| | || || || ||||| | || | || Sbjct 12081 CCCTCGTCACGGCTTATCAACTCATTGGAATAGGTCAAACCGGGCATGAGGCCCCTCTTC 12140 Query 13953 tttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAAC 14012 || | ||| || |||| |||||||| || |||||||| || |||||||| ||||| || Sbjct 12141 TTGATCCAGAAAATTGACGCAAATGATCCAGAAAAGAAAATACCCTCAACAGCAGCGAAA 12200 Query 14013 GCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCA 14072 || | | || || |||| | || | | | | ||||||||| ||||| || Sbjct 12201 GCGACGAGTCTCTCCGCAAAGGTTGACTCTCTATCAGATATCCATCGCAGTGCCCAATCT 12260 Query 14073 GAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTTTA 14132 | || |||| ||| | || | || ||||| |||| || ||| || |||| Sbjct 12261 GCCTTCCTTTTGATACATGGTATAGAATCCATAGCGGTAAACAAGCATTGTTTTTCTTGC 12320 Query 14133 GTA--CTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCA 14190 | | ||| |||||| || ||||| | | ||| |||| ||||| | ||||||| Sbjct 12321 GGATCCTT--AATGTAGGTGTCAATTAAAAGAGAATAGGTTTCCGAGTGCACATTTTCCA 12378 Query 14191 TAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATC 14250 | || || || ||||| ||||||| ||||| | ||| ||||| | | |||| Sbjct 12379 TCATAATTTGGAATCCATAGAAGCATCGTGCTTCGGCTATTTGGACTTCACATGAGAATC 12438 Query 14251 TTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCA 14301 ||| ||| |||||| || || || ||||| ||||||||||| |||| Sbjct 12439 GTTCTACCAGATTTTCGTTGACAATGCCATCGGATGCTGCAAAAAAAGCCA 12489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479665695326000