Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq4003 138 1e-27 >seq4003 Length=18687 Score = 138 bits (152), Expect = 1e-27 Identities = 370/563 (66%), Gaps = 7/563 (1%) Strand=Plus/Minus Query 13656 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 13715 ||| ||||| ||||| || | |||||| || | ||| || |||||||| || || Sbjct 14193 TAAGCACGCGAAATCTGTGTGCATGCCCTCGTCGCGGGAAATGAGCTCGTTTGAGAACGT 14134 Query 13716 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAA 13775 || |||||||| | || | ||| || | ||| || || | || || || || || || Sbjct 14133 CAAGCCTGGCATAAGCCCCCTTTTCTTGAGCCAGAAGATAGACGCAAACGAGCCAGAGAA 14074 Query 13776 GAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTT 13835 ||| || || ||||||||||| || || | | ||||| |||| | || || || || Sbjct 14073 GAAAATGCCTTCAACTGCAGCGAATGCCACCAAGCGTTCAGCAAATGTTGATTGTTGGTC 14014 Query 13836 TGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGC 13895 || |||||| || ||||| || | || || || ||| | || || ||||| || Sbjct 14013 AGAGATCCATCTTAACGCCCAATCCGCCTTCTTCTTGATACAGGGTATAGTGTCGATAGC 13954 Query 13896 ATTGA--ATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA 13953 || || | |||| | || | | | ||| ||||| ||||| ||||| | | | Sbjct 13953 ATCGAAGAGAAATTCACGTTGGCGAGAATCCTT--TATGTAGGTATCGATAAGGAGGGAA 13896 Query 13954 TACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCT 14013 || |||| || || |||||||| || ||| || ||||| || || || | ||||| Sbjct 13895 TATGTTTCTGAATGGATGTTTTCCATCATTATTTGGAAACCGTAGAAGCAGCGCGCTTCG 13836 Query 14014 GACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTA 14073 | ||||||||| |||||| ||| | | || || || ||||| ||||| | Sbjct 13835 GCAACTTGTACCTCGTTAGAAAATCGCTCTACGAGATTCTCGTTGACAATGCCATCGGAA 13776 Query 14074 GCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGA---GTTTT 14130 || ||||| || |||| | || | || |||| | || | | ||||| |||| Sbjct 13775 GCAGCAAAGAACGCCAGAACGTGTGATATGAAGTGGCGTTCATTGTCGTTGAGGCGTTTG 13716 Query 14131 TTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACA 14190 |||| || | |||||||| || || | || || | ||||| ||| || | Sbjct 13715 GTCCAGTCATGAAGGTCCTTAGAGAGGTCCATCTCTTCTGCCGTCCAGAAAGAGGCTTCG 13656 Query 14191 GCTTTTTTATACATTACCCATAT 14213 ||||| || ||||| |||||| Sbjct 13655 GCTTTCTTGTACATCTGCCATAT 13633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478526643279600