Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq4003 192 8e-44 >seq4003 Length=18687 Score = 192 bits (212), Expect = 8e-44 Identities = 374/551 (68%), Gaps = 6/551 (1%) Strand=Plus/Plus Query 42061 CAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGT 42120 || ||| ||||||||| ||||| ||||| || | || || || || |||||| | || Sbjct 12056 CAGACAAGCGAAATCGGTGTGCAACCCCTCGTCACGGCTTATCAACTCATTGGAATAGGT 12115 Query 42121 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAA 42180 | |||||||| ||||| | ||| || | ||| || || |||||||||||||||||||| Sbjct 12116 CAAACCGGGCATGAGGCCCCTCTTCTTGATCCAGAAAATTGACGCAAATGATCCAGAAAA 12175 Query 42181 GAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTC 42237 ||| || || || || || || || || | |||||||| || | | | || || Sbjct 12176 GAAAATACCCTCAACAGCAGCGAAAGCGACGAGTCTCTCCGCAAAGGTTGACTCTCTATC 12235 Query 42238 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 42297 | |||||| | |||||||| |||||| |||| | ||| || || | || || || Sbjct 12236 AGATATCCATCGCAGTGCCCAATCTGCCTTCCTTTTGATACATGGTATAGAATCCATAGC 12295 Query 42298 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATA 42357 |||| | | | |||||| | ||| |||| || || || || |||||| ||| Sbjct 12296 GGTAAACAAGCATTGTTTTTCTTGCGGATCCTTAATGTAGGTGTCAATTAAAAGAGAATA 12355 Query 42358 CATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGT 42417 |||| || || | ||||| || || || ||||| ||||| |||| || |||| Sbjct 12356 GGTTTCCGAGTGCACATTTTCCATCATAATTTGGAATCCATAGAAGCATCGTGCTTCGGC 12415 Query 42418 AACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGC 42477 | || ||||| | |||||||| | | ||||||||| || || || || || Sbjct 12416 TATTTGGACTTCACATGAGAATCGTTCTACCAGATTTTCGTTGACAATGCCATCGGATGC 12475 Query 42478 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA---TTTATT 42534 ||||||||| |||| || | || ||||| |||||||| |||| || | Sbjct 12476 TGCAAAAAAAGCCAGGACTCGAGATAGGAAATAGCGTTCGTCCGCATTTAAGCGTTCAGA 12535 Query 42535 CCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGC 42594 |||||| || ||| | ||| | || | || ||| | ||||| || || |||| || Sbjct 12536 CCAATCTACGAGATCGTGAGAAAGGTCAATCTCCTCTGCAGTCCAGAACGAAGCTTGGGC 12595 Query 42595 CTTTTTATACA 42605 ||| ||||||| Sbjct 12596 CTTCTTATACA 12606 Score = 167 bits (184), Expect = 3e-36 Identities = 385/577 (67%), Gaps = 10/577 (2%) Strand=Plus/Minus Query 42047 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAAT 42106 ||||| | |||| || || |||||||| ||||| ||||| || | ||| | Sbjct 14207 AAATGGCTGAACAATAAGCACGCGAAATCTGTGTGCATGCCCTCGTCGCGGGAAATGAGC 14148 Query 42107 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCA 42166 ||||| || ||||| | || ||||| || || | || || ||||| || ||||||||| Sbjct 14147 TCGTTTGAGAACGTCAAGCCTGGCATAAGCCCCCTTTTCTTGAGCCAGAAGATAGACGCA 14088 Query 42167 AATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA 42226 || || ||||| ||||| || ||||| ||||| || || || | | | || || || Sbjct 14087 AACGAGCCAGAGAAGAAAATGCCTTCAACTGCAGCGAATGCCACCAAGCGTTCAGCA-AA 14029 Query 42227 CCGGCACT----GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 42282 | | |||| ||||| || |||||||| |||||||| || | ||| || Sbjct 14028 TGTTGATTGTTGGTCAGAGATCCATCTTAACGCCCAATCCGCCTTCTTCTTGATACAGGG 13969 Query 42283 CATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATC 42342 || || || || |||| |||||| | | || | ||| || | || ||||| Sbjct 13968 TATAGTGTCGATAGCATCGAAGAGAAATTCACGTTGGCGAGAATCCTTTATGTAGGTATC 13909 Query 42343 GATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAA 42402 ||| | || ||| |||||||||| |||||||| || || || || |||||||| Sbjct 13908 GATAAGGAGGGAATATGTTTCTGAATGGATGTTTTCCATCATTATTTGGAAACCGTAGAA 13849 Query 42403 ACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCAC 42462 || | || |||| ||| ||||| || || ||||||| || | | ||| ||||| || Sbjct 13848 GCAGCGCGCTTCGGCAACTTGTACCTCGTTAGAAAATCGCTCTACGAGATTCTCGTTGAC 13789 Query 42463 TATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGG 42522 || || || || ||||| ||||||| || ||| ||| || | ||| | | Sbjct 13788 AATGCCATCGGAAGCAGCAAAGAACGCCAGAACGTGTGATATGAAGTGGCGTTCAT-TGT 13730 Query 42523 TGTTAA----TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCC 42578 ||| | ||| |||| |||| | || ||||| | || | |||||| |||||| Sbjct 13729 CGTTGAGGCGTTTGGTCCAGTCATGAAGGTCCTTAGAGAGGTCCATCTCTTCTGCCGTCC 13670 Query 42579 AAAATGATGCTTCTGCCTTTTTATACATATTCCAGAT 42615 | || || ||||| || || || ||||| | ||| || Sbjct 13669 AGAAAGAGGCTTCGGCTTTCTTGTACATCTGCCATAT 13633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671052035796400