Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq6550 91.5 1e-13 seq9516 87.8 2e-12 seq8842 86.0 6e-12 >seq6550 Length=14069 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 ||| || || | ||| | ||| | |||| ||||| ||||| || ||||||||||| Sbjct 10109 GCCGCCACGAAGACGAAGAACGAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGA 10050 Query 143017 CATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 143075 | |||| || | || || | || || |||||| | || || || ||||| || |||| Sbjct 10049 AAGGGTGCGTCCA-TCCTCCAACTGCTTGCCAGCAAAAATGAGTCGCTGCTGGTCCGGAG 9991 Query 143076 GTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTA 143135 | |||||||| || || || || ||| | | || | |||||| | || ||| | Sbjct 9990 GAATGCCTTCCTTATCCTGTATCTTCGCTTTGACATTATCGATCGTGTCTGAGGATTCAA 9931 Query 143136 CTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 | |||| ||| | ||| || || |||| ||||| ||||| || ||||| Sbjct 9930 CCTCAAGAGTTATCGTTTTTCCTGTCAGGGTTTTAACGAAGATCTGCAT 9882 >seq9516 Length=56271 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 142994 TCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAG 143053 ||||| || |||||||| || | |||| ||||||||||| || |||||| | Sbjct 47707 TCTTTCTGGATGTTGTAGTCAGAGAGCGTGCGGCCATCTTCGAGTTGCTTGCCAGCAAAA 47766 Query 143054 ATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGT 143113 || ||||| ||||| |||||||| ||||| || ||||| ||| || || | | Sbjct 47767 ATTAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTG 47826 Query 143114 TCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACG 143173 || | ||||||| | || || |||| || | |||||| ||||||| ||| || || Sbjct 47827 TCAATGGTGTCCGAAGACTCCACCTCAAGGGTAATCGTCTTTCCGGTCAGTGTCTTGACA 47886 Query 143174 AATATTTGCAT 143184 || || ||||| Sbjct 47887 AAAATCTGCAT 47897 >seq8842 Length=1545 Score = 86.0 bits (94), Expect = 6e-12 Identities = 126/172 (73%), Gaps = 5/172 (3%) Strand=Plus/Minus Query 50686 TTGGGCATGAACGC-AGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTT 50744 ||||| |||||| | || | | |||||| | ||||| ||||||||||||||||||||| | Sbjct 1286 TTGGG-ATGAACTCTAGTC-TCATGTGCCAATACATAGAGTTTGTTGCAGACAGATTGCT 1229 Query 50745 GTTGCAGCTGGGACAACC-GAAATACTATAATGCACGTAACCCCTTTCCGTTTATGAATA 50803 | | |||| ||||| ||| || ||| || || || ||||| || ||| || Sbjct 1228 TCTCTCGTTGGG-CAACCAGAAGTATTATCATTCAAACAATCCCTTCGATTTCATGGATT 1170 Query 50804 ACATATCGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATA 50855 ||||||||| | |||||||||||||| || || | || || |||||| Sbjct 1169 TAATATCGTTGCAAGGCAAAACAAACTTCTTTGAGAAGCGCGTTTCCGAATA 1118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506948551504800