Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq4003 187 4e-42 >seq4003 Length=18687 Score = 187 bits (206), Expect = 4e-42 Identities = 374/548 (68%), Gaps = 10/548 (2%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| || || | ||||| || ||||||| |||||| | || || Sbjct 13633 ATATGGCAGATGTACAAGAAAGCCGAAGCCTCTTTCTGGACGGCAGAAGAGATGGACCTC 13692 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || |||||||| | || ||| | || | | || | ||| || | || ||||| Sbjct 13693 TCTAAGGACCTTCATGACTGGACCAAACGCCTCAACGACAATGAACGCCACTTCATATCA 13752 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||| || |||| |||||||| | |||||||| || |||||||| ||||| || || || Sbjct 13753 CACGTTCTGGCGTTCTTTGCTGCTTCCGATGGCATTGTCAACGAGAATCTCGTAGAG-CG 13811 Query 125198 ATTCTCTCAAGAGTTGACCA-TTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256 ||| ||| | ||| | || | || | || | | ||||| ||||| |||||||| |||| Sbjct 13812 ATTTTCTAACGAGGT-ACAAGTTGCCGAAGCGCGCTGCTTCTACGGTTTCCAAATAATGA 13870 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGC 125316 | || ||| | || || |||| || || || || || | ||||| ||| | | Sbjct 13871 TGGAAAACATCCATTCAGAAACATATTCCCTCCTTATCGATACCTACATAAAGGATTCTC 13930 Query 125317 ---AACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373 ||||| || | ||||| | || |||||||| | || | ||| || |||| Sbjct 13931 GCCAACGTGAAT---TTCTCTTCGATGCTATCGACACTATACCCTGTATCAAGAAGAAGG 13987 Query 125374 CTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGG 125433 | | |||| | | | |||||| |||| | | || | | || || | |||||| Sbjct 13988 CGGATTGGGCGTTAAGATGGATCTCTGACCAACAATCAACATTTGCTGAACGCTTGGTGG 14047 Query 125434 CATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCA 125493 ||||||| || || || ||||| ||||| || || |||||| | ||||| ||||||| Sbjct 14048 CATTCGCTGCAGTTGAAGGCATTTTCTTCTCTGGCTCGTTTGCGTCTATCTTCTGGCTCA 14107 Query 125494 AGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553 |||| | || || ||||| || ||||| | |||||| | || || || ||||||| Sbjct 14108 AGAAAAGGGGGCTTATGCCAGGCTTGACGTTCTCAAACGAGCTCATTTCCCGCGACGAGG 14167 Query 125554 GCCTACAC 125561 || | ||| Sbjct 14168 GCATGCAC 14175 Score = 149 bits (164), Expect = 9e-31 Identities = 283/412 (69%), Gaps = 6/412 (1%) Strand=Plus/Minus Query 125146 TGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGATTCTCTC 125205 |||| || ||||| | |||||||| || |||||||| |||||| | ||||||||| Sbjct 12489 TGGCTTTTTTTGCAGCATCCGATGGCATTGTCAACGAAAATCTGGTAGAACGATTCTC-- 12432 Query 125206 AAGAGTTGACCA--TTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAA 125263 | | | | ||| | | || | ||||| || ||||||||||| ||||| || || Sbjct 12431 ATGTGAAGTCCAAATAGCCGAAGCACGATGCTTCTATGGATTCCAAATTATGATGGAAAA 12372 Query 125264 CGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGCAACGTAA 125323 ||||||||||||| || ||| | ||||||| |||||| ||||||||| || Sbjct 12371 TGTGCACTCGGAAACCTATTCTCTTTTAATTGACACCTACATTAAGGATCCGCAAGAAAA 12312 Query 125324 ACACATGCTC-TTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGG 125382 ||| ||||| |||| ||| || || | | || | ||| | ||||| | |||| Sbjct 12311 ACA-ATGCTTGTTTACCGCTATGGATTCTATACCATGTATCAAAAGGAAGGCAGATTGGG 12253 Query 125383 TGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCG 125442 | || ||||| ||| |||| | | || || ||||| || || ||||| | Sbjct 12252 CACTGCGATGGATATCTGATAGAGAGTCAACCTTTGCGGAGAGACTCGTCGCTTTCGCTG 12193 Query 125443 CCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCG 125502 | || ||||| || |||||||| || |||||| | || || ||| |||||||| | | Sbjct 12192 CTGTTGAGGGTATTTTCTTTTCTGGATCATTTGCGTCAATTTTCTGGATCAAGAAGAGGG 12133 Query 125503 GACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGG 125554 | ||||||||||| |||| | || ||||| ||| || |||||||| Sbjct 12132 GCCTCATGCCCGGTTTGACCTATTCCAATGAGTTGATAAGCCGTGACGAGGG 12081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740962954936400