Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq8842 105 6e-18 seq4003 104 2e-17 >seq8842 Length=1545 Score = 105 bits (116), Expect = 6e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 12865 ATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCCAT 12924 ||||||| ||| | || ||||| ||||||||||| |||| ||||| || ||||| Sbjct 1117 ATATTCGGAAACGCGCTTCTCAAAGAAGTTTGTTTTGCCTTGCAACGATATTAAATCCAT 1176 Query 12925 AAAATCGAAAGGATTTTTCGAACAATAGTATTTTTTACACCCTAATTCTAGTAACAATCT 12984 |||||||| ||||| || ||| ||| || || | || || || | |||||| Sbjct 1177 GAAATCGAAGGGATTGTTTGAATGATAATACTTCTGGTTGCCCAACGAGAGAAGCAATCT 1236 Query 12985 GTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTTAC 13044 ||| ||||||||||||||||| || ||| | | | ||||||| || ||||| || Sbjct 1237 GTCTGCAACAAACTCTATGTATTGGCACATGAGACTAGAGTTCATCCCAATTAACGCAAC 1296 Query 13045 AGGCATAGCTTCT 13057 ||||| |||||| Sbjct 1297 AGGCAGTGCTTCT 1309 >seq4003 Length=18687 Score = 104 bits (114), Expect = 2e-17 Identities = 339/522 (65%), Gaps = 5/522 (1%) Strand=Plus/Minus Query 13187 ATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATA 13246 || ||||||||||| || || | || ||||||||||| | ||| || | ||| || ||| Sbjct 14153 ATGAGCTCGTTTGAGAACGTCAAGCCTGGCATAAGCCCCCTTTTCTTGAGCCAGAAGATA 14094 Query 13247 GCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCA 13306 | |||||||| || || || || || ||||||||||| || || || | ||| | |||| Sbjct 14093 GACGCAAACGAGCCAGAGAAGAAAATGCCTTCAACTGCAGCGAATGCCACCAAGCGTTCA 14034 Query 13307 CCATACGTACTATTTTTACTC-TCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAAC 13365 || | || ||| || || ||||| || ||||| | || || | || | Sbjct 14033 GCAAATGT-TGATTGTTGGTCAGAGATCCATCTTAACGCCCAATCCGCCTTCTTCTTGAT 13975 Query 13366 GCAGTTCATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATA 13425 ||| ||| | || || || | || | | | | || | || || || Sbjct 13974 ACAGGGTATAGTGTCGATAGCATCGAAGAGAAATTCACGTTGGCGAGAATCCTTTATGTA 13915 Query 13426 AGTATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACC 13485 ||||| || | | | ||| |||||||||| || ||||||||| |||||||||||| Sbjct 13914 GGTATCGATAAGGAGGGAATATGTTTCTGAATGGATGTTTTCCATCATTATTTGGAAACC 13855 Query 13486 ATAAAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTC 13545 || || || | || || | || || || ||| |||||| ||| | | || || Sbjct 13854 GTAGAAGCAGCGCGCTTCGGCAACTTGTACCTCGTTAGAAAATCGCTCTACGAGATTCTC 13795 Query 13546 GTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttC 13605 ||| || || || || ||||||||| || || || | ||| || || | ||| Sbjct 13794 GTTGACAATGCCATCGGAAGCAGCAAAGAACGCCAGAACGTGTGATATGAAGTGGCGTTC 13735 Query 13606 GTTTTC--TGACAACTTT-AACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAAC 13662 || || ||| ||| ||| || ||| || || || | || | ||| || | Sbjct 13734 ATTGTCGTTGAGGCGTTTGGTCCAGTCATGAAGGTCCTTAGAGAGGTCCATCTCTTCTGC 13675 Query 13663 GGTCCAAAAAGAAGCAACAGCCTTCTTATACATCATCCATAT 13704 ||||| ||||| || | || ||||| |||||| |||||| Sbjct 13674 CGTCCAGAAAGAGGCTTCGGCTTTCTTGTACATCTGCCATAT 13633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430927825506780