Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq6550 150 4e-31 seq4003 149 1e-30 seq9516 143 6e-29 seq2300 109 1e-18 seq5568 104 5e-17 >seq6550 Length=14069 Score = 150 bits (166), Expect = 4e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| | || ||||| ||||||||||| || || || || || | ||| || Sbjct 9140 AAGGACGAGATGGAGAGTGGATTCCTTCTGAATATTGTAATCCGACAGGGTACGACCATC 9081 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| ||||||||||||||||| || || | ||| || || || || || |||||||| || Sbjct 9080 TTCCAGTTGTTTTCCAGCAAAGATGAGGCGCTGCTGGTCCGGTGGGATACCTTCTTTGTC 9021 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 |||||| || || || ||||| || | ||| || || || ||||| || || || || Sbjct 9020 CTGAATTTTCGCCTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCCAGCGTGATGGT 8961 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || ||||| || || ||||| || ||||| Sbjct 8960 CTTGCCCGTAAGCGTCTTCACAAAAATTTGCAT 8928 Score = 147 bits (162), Expect = 5e-30 Identities = 143/184 (78%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 104376 GAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCC 104435 |||| || ||||| || ||||| | ||| || ||||| ||||| |||||||| || || | Sbjct 9339 GAATGTTGTAGTCTGAAAGAGTGCGACCATCCTCTAGCTGTTTCCCAGCAAAGATCAGAC 9280 Query 104436 TCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGG 104495 ||| |||||||| ||||| ||||| |||||||||||||| || || ||||| || | || Sbjct 9279 GCTGCTGATCAGGTGGTATCCCTTCCTTATCCTGAATCTTCGCCTTGACATTGTCAATGG 9220 Query 104496 TATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCT 104555 | || || ||| || ||||| || || ||||| || || || ||||| || || |||| Sbjct 9219 TGTCAGAAGATTCGACTTCTAGCGTGATGGTCTTCCCTGTCAGCGTTTTGACGAAAATCT 9160 Query 104556 GCAT 104559 |||| Sbjct 9159 GCAT 9156 Score = 134 bits (148), Expect = 3e-26 Identities = 122/154 (79%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | |||||||| |||||||| || ||||| || ||||| | ||| || Sbjct 9866 AAGGACGAGGTGGAGGGTAGATTCCTTCTGAATGTTGTAGTCTGAAAGAGTGCGACCATC 9807 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||||| ||||| |||||||| || || | ||| |||||||| ||||| ||||| ||||| Sbjct 9806 CTCTAGCTGTTTCCCAGCAAAGATCAGACGCTGCTGATCAGGTGGTATCCCTTCCTTATC 9747 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCG 104500 ||||||||| || || ||||| || | ||| ||| Sbjct 9746 CTGAATCTTCGCCTTGACATTGTCAATGGTGTCG 9713 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | ||||| |||||||| || || || ||||| || || | || || Sbjct 10094 AAGAACGAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGAAAGGGTGCGTCCATC 10035 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || | || || ||||||||||| || | ||| || || ||||| || ||||| ||||| Sbjct 10034 CTCCAACTGCTTGCCAGCAAAAATGAGTCGCTGCTGGTCCGGAGGAATGCCTTCCTTATC 9975 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||| ||||| ||||| ||||| || | || || | ||| ||||| || || || || Sbjct 9974 CTGTATCTTCGCTTTGACATTATCGATCGTGTCTGAGGATTCAACCTCAAGAGTTATCGT 9915 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || ||||| || || |||||||| Sbjct 9914 TTTTCCTGTCAGGGTTTTAACGAAGATCTGCAT 9882 >seq4003 Length=18687 Score = 149 bits (164), Expect = 1e-30 Identities = 364/550 (66%), Gaps = 10/550 (2%) Strand=Plus/Minus Query 268743 TGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACT 268802 |||| || ||||| ||||| || ||||||| ||| || | || || ||| | || Sbjct 12606 TGTATAAGAAGGCCCAAGCTTCGTTCTGGACTGCAGAGGAGATTGACCTTTCTCACGATC 12547 Query 268803 TAATAGATTGGA---AAAATTTAAAACCAGAAGAAAGAAGATTTATATCTTATATTCTTG 268859 | |||||||| || ||||| | || ||| | || ||||| | || | Sbjct 12546 TCGTAGATTGGTCTGAACGCTTAAATGCGGACGAACGCTATTTCCTATCTCGAGTCCTGG 12487 Query 268860 CGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAG 268919 | |||||||||| ||||| || || ||||||||||| ||||| |||| | Sbjct 12486 CTTTTTTTGCAGCATCCGATGGCATTGTCAACGAAAATCTGGTAGAACGATTCTCATGTG 12427 Query 268920 AGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTC 268979 | || || || | ||||| |||| || || |||||||| || || |||||| | | Sbjct 12426 AAGTCCAAATAGCCGAAGCACGATGCTTCTATGGATTCCAAATTATGATGGAAAATGTGC 12367 Query 268980 ATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAA 269039 | || || | || ||| ||||| || || || || | ||| | ||||| || Sbjct 12366 ACTCGGAAACCTATTCTCTTTTAATTGACACCTACATTAAGGATCCGCAAGAAAAACAAT 12307 Query 269040 GACTATTTTCTTCTATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGA 269099 | | ||| | ||||| |||| ||| | | || || | || ||||| ||| Sbjct 12306 GCTTGTTTACCGCTATGGATTCTATACCATGTATCAAAAGGAAGGCAGATTGGGCACTGC 12247 Query 269100 AATGGATAAACGATAGCGCG-----CCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGT 269154 ||||||| ||||| | | | || ||||| || | || ||||| || ||||| Sbjct 12246 GATGGATATCTGATAGAGAGTCAACCTTTGCGGAG--AGACTCGTCGCTTTCGCTGCTGT 12189 Query 269155 AGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCT 269214 || ||||| |||||||| || || ||||| | || || ||| | ||||| || ||||| Sbjct 12188 TGAGGGTATTTTCTTTTCTGGATCATTTGCGTCAATTTTCTGGATCAAGAAGAGGGGCCT 12129 Query 269215 TATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGA 269274 ||||| || || || | || || || ||||||||| | ||||| || || ||| ||| Sbjct 12128 CATGCCCGGTTTGACCTATTCCAATGAGTTGATAAGCCGTGACGAGGGGTTGCACACCGA 12069 Query 269275 CTTCGCTTGT 269284 ||||||||| Sbjct 12068 TTTCGCTTGT 12059 Score = 129 bits (142), Expect = 1e-24 Identities = 374/571 (65%), Gaps = 16/571 (3%) Strand=Plus/Plus Query 268733 ATATGGAGGATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTG 268792 |||||| ||||||||| | |||| || ||||| ||||| | |||||| | || || Sbjct 13633 ATATGGCAGATGTACAAGAAAGCCGAAGCCTCTTTCTGGACGGCAGAAGAGATGGACCTC 13692 Query 268793 TCTTATGAC-TTAATAGATTGGA--AAAATTTAAAACCAGAA-GAAAGAAGATTTATATC 268848 ||| | ||| || || || |||| ||| ||| | || ||| | || ||||| Sbjct 13693 TCTAAGGACCTTCAT-GACTGGACCAAACGCCTCAACGACAATGAACGCCACTTCATATC 13751 Query 268849 TTATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAA 268908 | |||| ||||| ||||| | | ||||| || || ||||| ||||| |||||| Sbjct 13752 ACACGTTCTGGCGTTCTTTGCTGCTTCCGATGGCATTGTCAACGAGAATCTCGTAGAGCG 13811 Query 268909 GTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTAT 268968 || | | | |||||||| || | ||||| | || || ||||| ||||| ||| || Sbjct 13812 ATTTTCTAACGAGGTACAAGTTGCCGAAGCGCGCTGCTTCTACGGTTTCCAAATAATGAT 13871 Query 268969 AGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAA 269028 ||||| || |||||||| | || || | || ||||| || ||| | ||| Sbjct 13872 GGAAAACATCCATTCAGAAACATATTCCCTCCTTATCGATACCTACATAAAGGATTCTCG 13931 Query 269029 CGAAAAGAAAAGACTATTTTCTTCTATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGA 269088 | || || || || | |||| ||||| |||| | | || || | || Sbjct 13932 CCAACGTGAATTTCTCTTCGATGCTATCGACACTATACCCTGTATCAAGAAGAAGGCGGA 13991 Query 269089 ATGGGCTCTGAAATGGATA-------AACGATAGCGCGCCTTACGGAGAAAGGTTAGTTG 269141 ||||| | | |||||| ||| || | | | | ||| | || || | Sbjct 13992 TTGGGCGTTAAGATGGATCTCTGACCAACAAT----CAACATTTGCTGAACGCTTGGTGG 14047 Query 269142 CTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGA 269201 | || || || || ||||| || ||||| || || || ||||| ||||||| ||| | | Sbjct 14048 CATTCGCTGCAGTTGAAGGCATTTTCTTCTCTGGCTCGTTTGCGTCTATCTTCTGGCTCA 14107 Query 269202 AGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAG 269261 ||||||| || ||||||||||| || || ||||| ||||| | || | | ||||| | Sbjct 14108 AGAAAAGGGGGCTTATGCCAGGCTTGACGTTCTCAAACGAGCTCATTTCCCGCGACGAGG 14167 Query 269262 GTTTACACTGCGACTTCGCTTGTTTATTATT 269292 | | ||| || ||||| || ||||| || Sbjct 14168 GCATGCACACAGATTTCGCGTGCTTATTGTT 14198 >seq9516 Length=56271 Score = 143 bits (158), Expect = 6e-29 Identities = 147/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 |||||||| || || |||||||| || || | || ||||| ||||| || ||||||||| Sbjct 47707 TCTTTCTGGATGTTGTAGTCAGAGAGCGTGCGGCCATCTTCGAGTTGCTTGCCAGCAAAA 47766 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 ||||| | ||| || || ||||| || || || || ||||||||||| || || || || Sbjct 47767 ATTAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTG 47826 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | ||| || || || ||||| || ||||| ||||| || || ||||| || ||| Sbjct 47827 TCAATGGTGTCCGAAGACTCCACCTCAAGGGTAATCGTCTTTCCGGTCAGTGTCTTGACA 47886 Query 104549 AATATCTGCATT 104560 || ||||||||| Sbjct 47887 AAAATCTGCATT 47898 Score = 87.8 bits (96), Expect = 4e-12 Identities = 106/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 104346 TAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGT 104405 |||| || ||||| | || || || || || |||||||| || || ||||||| ||| | Sbjct 47913 TAAG-ACAAGATGAAGAGTTGACTCCTTTTGGATATTATAATCCGAGAGAGTTCGACCAT 47971 Query 104406 CTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTAT 104465 |||| |||||||| || |||||||| || | ||||||||||| || || | || || | Sbjct 47972 CTTCAAGTTGTTTGCCGGCAAAAATGAGACGTTGTTGATCAGGGGGGATACTATCGTTCT 48031 Query 104466 CCTGAATCTTT-GCTTTTACAT 104486 ||| | ||| |||| |||| Sbjct 48032 ATTGAGTTTTTATCTTTGACAT 48053 >seq2300 Length=1447 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || ||||| |||||||| || |||| || ||||| | || || Sbjct 921 AAGGACGAGGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTATGAAAGAGTGCGCCCATC 980 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || ||||| |||||||| || || | ||| |||||| ||||| ||| ||||| Sbjct 981 CTCCAGCTGTTTCCCAGCAAAGATCAGACGCTGCCAATCAGGTGGTATCTTTTCCTTATC 1040 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| || || |||| || | | | || || | ||||| || || ||| | Sbjct 1041 CTGAATCTTCGCCTTGACATCGTCAATGATGTCAGAAGACTTCACCTCCAGGGTGATACT 1100 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || |||||| || ||||| || ||||| Sbjct 1101 CTTGCCCGTAAGTCCCTTCACAAAAATTTGCAT 1133 >seq5568 Length=9436 Score = 104 bits (114), Expect = 5e-17 Identities = 153/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || ||||| |||||||| || |||| || ||||| | || || Sbjct 6521 AAGGACGAGGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTATGAAAGAGTGCGCCCATC 6580 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT--TTA 104464 || || ||||| |||||||| || || | ||| |||||| ||||| ||||| ||| Sbjct 6581 CTCCAGCTGTTTCCCAGCAAAGATCAGACGCTGCCAATCAGGTGGTAT--CTTCTCCTTA 6638 Query 104465 TCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATA 104524 ||||||||| | || || |||| || | | | || || | ||||| || || ||| Sbjct 6639 TCCTGAATCCTCGCCTTGACATCGTCAATGATGTCAGAAGACTTCACCTCCAGGGTGATA 6698 Query 104525 GTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||| || |||||| || ||||| || ||||| Sbjct 6699 CTCTTGCCCGTAAGTCCCTTCACAAAAATTTGCAT 6733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151245123686120