Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq6636 114 2e-21 seq10081 91.5 2e-14 >seq6636 Length=13050 Score = 114 bits (126), Expect = 2e-21 Identities = 117/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||||||||| |||||||||||||| || ||||||||||| || |||||| | || Sbjct 11206 AGGTATCACCAAGCCCGCTATCCGTCGTCTCGCCCGTCGTGGTGGTGTGAAGCGTATTTC 11265 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCA 16590 ||| ||| | || || |||| |||| || | ||||||||| | ||| ||| |||| Sbjct 11266 TGGCTTGATTTACGAGGAGACACGTGGCGTCCTTAAGATCTTCTTGGAGAACGTCATCCG 11325 Query 16591 TGATGCTTTCCACTATACCGAGCACGCTAAACG 16623 || || || || || ||||| |||||||| Sbjct 11326 CGACTCTGTCACTTACACTGAGCATGCTAAACG 11358 >seq10081 Length=28386 Score = 91.5 bits (100), Expect = 2e-14 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||| |||||||| ||||||||||| || ||||||||||| || |||||| | || Sbjct 26287 AGGTATCACAAAGCCAGCCATCCGTCGTCTTGCGCGTCGTGGTGGTGTAAAGCGTATTTC 26346 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCT 16575 ||| | | ||||| || | |||| ||| | ||||||||||| Sbjct 26347 TGGCCTCATTTATGAGGAAACACGTGGTGTCCTCAAGATCTTCCT 26391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79065700350270