Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq4003 134 1e-26 >seq4003 Length=18687 Score = 134 bits (148), Expect = 1e-26 Identities = 289/435 (66%), Gaps = 2/435 (0%) Strand=Plus/Plus Query 21472 CAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGT 21531 || ||| || ||||| ||||| || || || | ||||| || ||||| ||| | || Sbjct 12056 CAGACAAGCGAAATCGGTGTGCAACCCCTCGTCACGGCTTATCAACTCATTGGAATAGGT 12115 Query 21532 TAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAA 21591 ||||||||||| | || ||||| || | ||| || ||||||||||||| ||| ||||| Sbjct 12116 CAAACCGGGCATGAGGCCCCTCTTCTTGATCCAGAAAATTGACGCAAATGATCCAGAAAA 12175 Query 21592 GAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATC 21651 |||||| |||||||| ||||| || || || | || || | | || || ||| |||| Sbjct 12176 GAAAATACCCTCAACAGCAGCGAAAGCGACGAGTCTCTCCGCAAAGGTTGACTCTCTATC 12235 Query 21652 CAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGC 21711 |||||||| |||||| | |||||| ||| ||||| || | ||| ||||| Sbjct 12236 AGATATCCATCGCAGTGCCCAATCTGCCTTCCTTTTGATACATGGTATAGAATCCATAGC 12295 Query 21712 TTTTAAAAGATGAtt-tttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTAT 21770 |||| | ||| |||||| | ||| | ||| | || Sbjct 12296 -GGTAAACAAGCATTGTTTTTCTTGCGGATCCTTAATGTAGGTGTCAATTAAAAGAGAAT 12354 Query 21771 ACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTG 21830 | |||| || || | |||||| ||| || || ||||| || || |||| ||| || | Sbjct 12355 AGGTTTCCGAGTGCACATTTTCCATCATAATTTGGAATCCATAGAAGCATCGTGCTTCGG 12414 Query 21831 AACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGG 21890 ||| || || | | ||||||| ||| ||||| || || || ||||| | Sbjct 12415 CTATTTGGACTTCACATGAGAATCGTTCTACCAGATTTTCGTTGACAATGCCATCGGATG 12474 Query 21891 CGGCAAAAAATGCCA 21905 | |||||||| |||| Sbjct 12475 CTGCAAAAAAAGCCA 12489 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 21518 TCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCA 21577 || || || || || || || ||||| | || || || || | ||| || || |||||| Sbjct 14147 TCGTTTGAGAACGTCAAGCCTGGCATAAGCCCCCTTTTCTTGAGCCAGAAGATAGACGCA 14088 Query 21578 AATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTAT 21637 || | || || ||||||||||| ||||| ||||| ||||| || || |||||| | || Sbjct 14087 AACGAGCCAGAGAAGAAAATGCCTTCAACTGCAGCGAATGCCACCAAGCGTTCAGCAAAT 14028 Query 21638 GTAGATTCTTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCA 21697 || |||| || || | |||||| || ||||| | ||||| | || ||||| Sbjct 14027 GTTGATTGTTGGTCAGAGATCCATCTTAACGCCCAATCCGCCTTCTTCTTGATACAGGGT 13968 Query 21698 ATTGTATCAATAGC 21711 || || || ||||| Sbjct 13967 ATAGTGTCGATAGC 13954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531831719383600