Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq4003 188 9e-43 >seq4003 Length=18687 Score = 188 bits (208), Expect = 9e-43 Identities = 379/561 (68%), Gaps = 6/561 (1%) Strand=Plus/Plus Query 33300 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 33359 || ||| ||||||||| ||||| |||||||| | || || | || |||||| | || Sbjct 12056 CAGACAAGCGAAATCGGTGTGCAACCCCTCGTCACGGCTTATCAACTCATTGGAATAGGT 12115 Query 33360 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAA 33419 | |||||||| ||||| | ||| || | ||| || || || || |||||||||||||| Sbjct 12116 CAAACCGGGCATGAGGCCCCTCTTCTTGATCCAGAAAATTGACGCAAATGATCCAGAAAA 12175 Query 33420 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTC 33476 ||| || || || || ||||| || || | |||||||| || | | | || || Sbjct 12176 GAAAATACCCTCAACAGCAGCGAAAGCGACGAGTCTCTCCGCAAAGGTTGACTCTCTATC 12235 Query 33477 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 33536 | |||||| | |||||||| |||||| |||| | ||| || || | || || || Sbjct 12236 AGATATCCATCGCAGTGCCCAATCTGCCTTCCTTTTGATACATGGTATAGAATCCATAGC 12295 Query 33537 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATA 33596 |||| | | | |||||| | ||| |||| || || || || |||||| ||| Sbjct 12296 GGTAAACAAGCATTGTTTTTCTTGCGGATCCTTAATGTAGGTGTCAATTAAAAGAGAATA 12355 Query 33597 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 33656 ||||||| || | ||||| || || || ||||| ||||| |||| || |||| Sbjct 12356 GGTTTCCGAGTGCACATTTTCCATCATAATTTGGAATCCATAGAAGCATCGTGCTTCGGC 12415 Query 33657 AATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGC 33716 || || ||||| | |||||||| ||| |||||| || || || || || || Sbjct 12416 TATTTGGACTTCACATGAGAATCGTTCTACCAGATTTTCGTTGACAATGCCATCGGATGC 12475 Query 33717 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATT 33773 ||||||||| |||| || | || ||||| |||||| | ||| ||| | Sbjct 12476 TGCAAAAAAAGCCAGGACTCGAGATAGGAAATAGCGTTCGTCCGCATTTAAGCGTTCAGA 12535 Query 33774 CCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGC 33833 |||||| || ||| | ||| | || | || || | ||||| || || || | || Sbjct 12536 CCAATCTACGAGATCGTGAGAAAGGTCAATCTCCTCTGCAGTCCAGAACGAAGCTTGGGC 12595 Query 33834 CTTTTTATACATGTTCCAGAT 33854 ||| ||||||| || ||| || Sbjct 12596 CTTCTTATACAAGTGCCAAAT 12616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622866294732400