Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq4003 113 1e-19 seq9433 95.1 3e-14 >seq4003 Length=18687 Score = 113 bits (124), Expect = 1e-19 Identities = 255/380 (67%), Gaps = 5/380 (1%) Strand=Plus/Minus Query 22274 CATCTGAAATTCAA-TACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAA 22332 ||| |||| | ||| || || || || |||| |||||||| | ||||| ||||| ||| Sbjct 12432 CATGTGAAGTCCAAATAGCC-GAAGCACGATGCTTCTATGGATTCCAAATTATGATGGAA 12374 Query 22333 AATGTTCACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGACGAA 22392 ||||| ||| ||||||| |||||| | | | | | | | | ||| | ||| Sbjct 12373 AATGTGCACTCGGAAACCTATTCTCTTTTAATTGACACCTACATTAAGGATCCGCAAGAA 12314 Query 22393 CAACGAAACTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGG 22452 ||| | ||| || ||| || | || | || || || | |||||||||||| Sbjct 12313 AAACAATGCTTGTTTACCGCTATGGATTCTATACCATGTATCAAAAGGAAGGCAGATTGG 12254 Query 22453 GCGCTGAAATGGATGAACAATGAACGTTCA---TTCGCGGAACGTCTTATTGCATTTGCT 22509 || ||| |||||| || | ||| || ||||| | || | || || ||| Sbjct 12253 GCACTGCGATGGATATCTGATAGAGAGTCAACCTTTGCGGAGAGACTCGTCGCTTTCGCT 12194 Query 22510 GTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGT 22569 | ||||| || ||||||||||||||| ||||| |||| || ||| | || || | Sbjct 12193 GCTGTTGAGGGTATTTTCTTTTCTGGATCATTTGCGTCAATTTTCTGGATCAAGAAGAGG 12134 Query 22570 GCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCAT 22629 | | ||||| ||| | || | ||| |||||||| || ||||| || ||||| | || Sbjct 12133 GGCCTCATGCCCGGTTTGACCTATTCCAATGAGTTGATAAGCCGTGACGAGGGGTTGCAC 12074 Query 22630 ACCGATTTTGCGTGTATGCT 22649 |||||||| || ||| |||| Sbjct 12073 ACCGATTTCGCTTGTCTGCT 12054 Score = 107 bits (118), Expect = 5e-18 Identities = 155/219 (71%), Gaps = 11/219 (5%) Strand=Plus/Plus Query 22432 ATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATG-------AACAATGAACGTTCATT 22484 || ||||| ||||| ||||||||| | | |||||| |||||| ||| ||| Sbjct 13975 ATCAAGAAGAAGGCGGATTGGGCGTTAAGATGGATCTCTGACCAACAATCAAC----ATT 14030 Query 22485 CGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTG 22544 || ||||| | | ||||| |||| ||||||||||||||||| ||||| | ||| Sbjct 14031 TGCTGAACGCTTGGTGGCATTCGCTGCAGTTGAAGGCATTTTCTTCTCTGGCTCGTTTGC 14090 Query 22545 TGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTT 22604 | ||||| ||||| || ||| | | ||||||| || | ||||| ||||| ||| | Sbjct 14091 GTCTATCTTCTGGCTCAAGAAAAGGGGGCTTATGCCAGGCTTGACGTTCTCAAACGAGCT 14150 Query 22605 AATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTG 22643 ||| ||| || ||||| | || || ||||| ||||| Sbjct 14151 CATTTCCCGCGACGAGGGCATGCACACAGATTTCGCGTG 14189 >seq9433 Length=11862 Score = 95.1 bits (104), Expect = 3e-14 Identities = 208/312 (67%), Gaps = 0/312 (0%) Strand=Plus/Minus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450 ||||||| || ||| | ||| || ||||| |||||||||||| | | ||| Sbjct 3052 TTCGGATTCAAAACGCTAGAGCGTTCATACCTTCTTCGTATCAATGGCCGCGTCGCTGAG 2993 Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510 || || ||||||||| | ||||| || || | ||||| ||| | ||| | ||| Sbjct 2992 CGACCACAGCATATGATTATGCGGGTCGCCGTCGGTATTCATGGGAGTGATATCGATCGT 2933 Query 363511 GCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACAATG 363570 | || || || ||||| || | | ||| || || || || | || || | Sbjct 2932 GTTATCGAGACTTATAATCTCATGTCCGAGCGTTACTTTACTCATGCATCTCCCACCTTA 2873 Query 363571 TACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGAC 363630 | |||||| ||||| | ||||| || | ||| ||||| ||| | ||||| || Sbjct 2872 TTCAATGCCGGAACGCCAAATCCTCAACTCAGTTCATGCTTCCTTGTTTGCATGAAAGAA 2813 Query 363631 GATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCA 363690 || || |||||||| |||| ||||||| | ||||||||||| | ||| || | || Sbjct 2812 GACTCGATCGAGGGCATCTATGACACATTGAAGAATTGTGCGATGATTAGTAAAACGGCC 2753 Query 363691 GGCGGAATTGGT 363702 ||||| |||||| Sbjct 2752 GGCGGTATTGGT 2741 Score = 84.2 bits (92), Expect = 6e-11 Identities = 241/369 (65%), Gaps = 4/369 (1%) Strand=Plus/Minus Query 364194 CAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTAT 364253 |||||||||||| || || |||| || || || |||| | || |||||||| Sbjct 2099 CAAGTCCAACCAACAACATATTGGGACCATCAAGTCCTCCAACTTGTGCTGTGAGATTAT 2040 Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313 ||||||| | | || ||||| || || || || ||| | || || | || | || | Sbjct 2039 TGAATACTCGTCACCGGACGAAACCGCTGTTTGCAACTTGGCATCCCTTGCTTTGCCAAC 1980 Query 364314 GTTTGTAAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTAC 364373 || || | |||| | |||||| ||| | | | ||||| || | | ||| Sbjct 1979 TTTCATATCAAATGGAGCATTTGACTTCCACAAGTTGCACGACGTTGCCAAGGTCGTTAC 1920 Query 364374 TTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTC 364433 | | || ||| || | || |||| || |||||||| ||||| || || || || Sbjct 1919 TCGTAACCTCAACGGCATCATTGACATAAACTATTATCCCATTCCCGAGGCTCGTCGGTC 1860 Query 364434 TAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGAT 364493 || ||||| || || || |||||| ||||||| || || | || || || ||| Sbjct 1859 AAACATGCGCCACCGGCCAATTGGTATTGGTGTGCAAGGTTTGGCCGATACCTTCATG-- 1802 Query 364494 GCTCAA--GATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAA 364551 |||| | |||| | |||||||| |||| ||| || || | | ||||||||| Sbjct 1801 GCTCTACGGATGCCGTTTGATTCTCCTGTCGCCAAGCAACTCAACATCCAAATCTTTGAA 1742 Query 364552 ACAATGTAT 364560 ||||| ||| Sbjct 1741 ACAATTTAT 1733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303180095124980