Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq1542 140 2e-28 seq12 107 1e-18 seq6550 104 2e-17 >seq1542 Length=1997 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 401 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 460 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 461 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 495 >seq12 Length=2416 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct 1883 CTCTCTTTCCAAAGTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 1824 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 1823 GCCAATATTTAGCTTTA 1807 >seq6550 Length=14069 Score = 104 bits (114), Expect = 2e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 38114 ATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTG 38173 ||| |||||| ||||| |||||||||||||| |||| ||| | || || | ||| Sbjct 9131 ATGGAGAGTGGATTCCTTCTGAATATTGTAATCCGACAGGGTACGACCATCTTCCAGTTG 9072 Query 38174 TTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTT 38233 |||||| ||||| || ||||| || || || | |||| |||||||||||| |||||| Sbjct 9071 TTTTCCAGCAAAGATGAGGCGCTGCTGGTCCGGTGGGATACCTTCTTTGTCCTGAATTTT 9012 Query 38234 TTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGT 38293 ||||||||| | || || || | || || || | || || || || ||||| Sbjct 9011 CGCCTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCCAGCGTGATGGTCTTGCCCGT 8952 Query 38294 CAAGGTTTTCACGAATATCTGCATG 38318 | || ||||| || || |||||| Sbjct 8951 AAGCGTCTTCACAAAAATTTGCATG 8927 Score = 82.4 bits (90), Expect = 5e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||| | |||| ||| | || |||||||| ||||| ||||||||||| Sbjct 8926 CCACCACGAAGACGGAGGACCAGATGCAACGTACTCTCCTTCTGAATGTTGTAATCAGAA 8867 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | | |||| | || || || ||||| || ||||| || ||||| |||||||||| Sbjct 8866 AGAGTACGTCCATCCTCCAACTGTTTCCCCGCAAAGATGAGGCGCTGTTGATCGG 8812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334904786264090