Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq4003 210 3e-49 >seq4003 Length=18687 Score = 210 bits (232), Expect = 3e-49 Identities = 378/551 (69%), Gaps = 6/551 (1%) Strand=Plus/Plus Query 32657 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 32716 || ||| ||||||||| ||| | |||||||| | || || || || |||||| | || Sbjct 12056 CAGACAAGCGAAATCGGTGTGCAACCCCTCGTCACGGCTTATCAACTCATTGGAATAGGT 12115 Query 32717 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 32776 | |||||||| ||||| | ||| || | ||| || || |||||||||||||||||||| Sbjct 12116 CAAACCGGGCATGAGGCCCCTCTTCTTGATCCAGAAAATTGACGCAAATGATCCAGAAAA 12175 Query 32777 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTC 32833 |||||| || || || || || || || | |||||||| || | | | || || Sbjct 12176 GAAAATACCCTCAACAGCAGCGAAAGCGACGAGTCTCTCCGCAAAGGTTGACTCTCTATC 12235 Query 32834 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGC 32893 | |||||| | |||||||| |||||| |||| | ||| || || | || ||||| Sbjct 12236 AGATATCCATCGCAGTGCCCAATCTGCCTTCCTTTTGATACATGGTATAGAATCCATAGC 12295 Query 32894 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATA 32953 |||| | | | |||||| | ||| |||| || || ||||| |||||| ||| Sbjct 12296 GGTAAACAAGCATTGTTTTTCTTGCGGATCCTTAATGTAGGTGTCAATTAAAAGAGAATA 12355 Query 32954 CATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGT 33013 ||||||| || | ||||| || ||||| ||||| |||||||||| || |||| Sbjct 12356 GGTTTCCGAGTGCACATTTTCCATCATAATTTGGAATCCATAGAAGCATCGTGCTTCGGC 12415 Query 33014 AATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGC 33073 || || ||||| | ||||||||| | | |||||| || || || || || || Sbjct 12416 TATTTGGACTTCACATGAGAATCGTTCTACCAGATTTTCGTTGACAATGCCATCGGATGC 12475 Query 33074 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATT 33130 ||||||||| |||| || | || ||||| |||||| | ||| ||| | Sbjct 12476 TGCAAAAAAAGCCAGGACTCGAGATAGGAAATAGCGTTCGTCCGCATTTAAGCGTTCAGA 12535 Query 33131 CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGC 33190 |||||| || ||| | ||| | || | || || | ||||| || || || | || Sbjct 12536 CCAATCTACGAGATCGTGAGAAAGGTCAATCTCCTCTGCAGTCCAGAACGAAGCTTGGGC 12595 Query 33191 CTTTTTATACA 33201 ||| ||||||| Sbjct 12596 CTTCTTATACA 12606 Score = 163 bits (180), Expect = 4e-35 Identities = 384/576 (67%), Gaps = 8/576 (1%) Strand=Plus/Minus Query 32643 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAAT 32702 ||||| | |||| || || |||||||| ||| | |||||||| | ||| | Sbjct 14207 AAATGGCTGAACAATAAGCACGCGAAATCTGTGTGCATGCCCTCGTCGCGGGAAATGAGC 14148 Query 32703 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 32762 ||||| || ||||| | || ||||| || || | || || ||||| || || |||||| Sbjct 14147 TCGTTTGAGAACGTCAAGCCTGGCATAAGCCCCCTTTTCTTGAGCCAGAAGATAGACGCA 14088 Query 32763 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA 32822 || || ||||| |||||||| ||||| ||||| || || || | | | || || | Sbjct 14087 AACGAGCCAGAGAAGAAAATGCCTTCAACTGCAGCGAATGCCACCAAGCGTTCAGCAAAT 14028 Query 32823 CCGGC--GCTG-TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 32879 | | || ||| ||||| || |||||||| |||||||| || | ||| || Sbjct 14027 GTTGATTGTTGGTCAGAGATCCATCTTAACGCCCAATCCGCCTTCTTCTTGATACAGGGT 13968 Query 32880 ATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCA 32939 || || || ||||||| |||||| | | || | ||| || | || ||||| Sbjct 13967 ATAGTGTCGATAGCATCGAAGAGAAATTCACGTTGGCGAGAATCCTTTATGTAGGTATCG 13908 Query 32940 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAG 32999 || | || ||| |||| ||||| |||||||| || ||||| || ||||||||| Sbjct 13907 ATAAGGAGGGAATATGTTTCTGAATGGATGTTTTCCATCATTATTTGGAAACCGTAGAAG 13848 Query 33000 CATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACT 33059 || | || |||| || ||||| || || ||||||| ||| | | ||| || || || Sbjct 13847 CAGCGCGCTTCGGCAACTTGTACCTCGTTAGAAAATCGCTCTACGAGATTCTCGTTGACA 13788 Query 33060 ATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGT 33119 || || || || ||||| ||||||| || ||| ||| || | ||| | || Sbjct 13787 ATGCCATCGGAAGCAGCAAAGAACGCCAGAACGTGTGATATGAAGTGGCGTTCAT-TGTC 13729 Query 33120 GTT----AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCA 33175 ||| |||| |||| |||| | || ||||| | |||| ||||| | ||||| Sbjct 13728 GTTGAGGCGTTTGGTCCAGTCATGAAGGTCCTTAGAGAGGTCCATCTCTTCTGCCGTCCA 13669 Query 33176 AAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 33211 || || || || || || || ||||| | ||| || Sbjct 13668 GAAAGAGGCTTCGGCTTTCTTGTACATCTGCCATAT 13633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633549707044000