Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq6550 147 2e-30 seq9516 82.4 7e-11 >seq6550 Length=14069 Score = 147 bits (162), Expect = 2e-30 Identities = 162/213 (76%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| | || || || ||||||| | || |||||||| ||| Sbjct 8928 ATGCAAATTTTTGTGAAGACGCTTACGGGCAAGACCATCACGCTGGAGGTGGAGTCTTCT 8987 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| ||||| | |||| ||| ||||||||||| || ||||| ||||| Sbjct 8988 GACACCATCGACAATGTGAAGGCGAAAATTCAG-GACAAAGAAGGTATCCCACCGGACCA 9046 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || ||||| || |||||| | ||||||| ||| || || |||||||| Sbjct 9047 GCAGCGCCTCATCTTTGCTGGAAAACAACTGGAAGATGGTCGTACCCTGTCGGATTACAA 9106 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||| || |||||||| || ||| | || || Sbjct 9107 TATTCAGAAGGAATCCACTCTCCATCTCGTCCT 9139 >seq9516 Length=56271 Score = 82.4 bits (90), Expect = 7e-11 Identities = 107/147 (73%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 25081 AAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCA 25140 ||||| ||| | | || || | || || ||||| ||||| || | ||||||||||||| Sbjct 48042 AAAAACTCAAT-AGAACGATAGTATCCCCCCTGATCAACAACGTCTCATTTTTGCCGGCA 47984 Query 25141 AACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTAC 25200 ||||| | ||||||| ||| ||| | ||||| ||||| ||||| || || || || | Sbjct 47983 AACAACTTGAAGATGGTCGAACTCTCTCGGATTATAATATCCAAAAGGAGTCAACTCTTC 47924 Query 25201 ATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 || | || || | || | ||||||| Sbjct 47923 ATCTTGTCTTACGTCTTCGTGGAGGAA 47897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433273128487850