Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq6550 122 7e-23 seq9516 120 3e-22 seq5568 86.0 5e-12 seq2300 86.0 5e-12 >seq6550 Length=14069 Score = 122 bits (134), Expect = 7e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || |||||||| | || || |||||| | |||||||| || ||| || | Sbjct 9882 ATGCAGATCTTCGTTAAAACCCTGACAGGAAAAACGATAACTCTTGAGGTTGAATCCTCA 9941 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || ||||| || || || || ||||| || ||||| || || || Sbjct 9942 GACACGATCGATAATGTCAAAGCGAAGATACAGGATAAGGAAGGCATTCCTCCGGACCAG 10001 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| ||||| ||||| |||||| |||||| | || ||||||||| Sbjct 10002 CAGCGACTCATTTTTGCTGGCAAGCAGTTGGAGGATGGACGCACCCTTTCTGATTACAAC 10061 Query 22399 ATTCAAAAAGAATCCAC 22415 || || ||||| || || Sbjct 10062 ATCCAGAAAGAGTCTAC 10078 Score = 113 bits (124), Expect = 4e-20 Identities = 136/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| ||||| || ||||| | || || || || |||| || ||||| ||| | | Sbjct 9155 GATGCAGATTTTCGTCAAAACGCTGACAGGGAAGACCATCACGCTAGAAGTCGAATCTTC 9214 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | ||| || |||| || ||||| || ||||| || || ||||| ||||| Sbjct 9215 TGACACCATTGACAATGTCAAGGCGAAGATTCAGGATAAGGAAGGGATACCACCTGATCA 9274 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || ||||| || ||||| || |||||| |||||||| ||||| | || || ||||| Sbjct 9275 GCAGCGTCTGATCTTTGCTGGGAAACAGCTAGAGGATGGTCGCACTCTTTCAGACTACAA 9334 Query 22398 CATTC 22402 ||||| Sbjct 9335 CATTC 9339 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || || | || || || || |||| || || ||||| | | Sbjct 8928 ATGCAAATTTTTGTGAAGACGCTTACGGGCAAGACCATCACGCTGGAGGTGGAGTCTTCT 8987 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || | || |||||||| ||||| || ||||| ||||| || || Sbjct 8988 GACACCATCGACAATGTGAAGGCGAAAATTCAGGACAAAGAAGGTATCCCACCGGACCAG 9047 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| || ||||| | || ||| || ||| | || |||||||| Sbjct 9048 CAGCGCCTCATCTTTGCTGGAAAACAACTGGAAGATGGTCGTACCCTGTCGGATTACAAT 9107 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || |||||||| Sbjct 9108 ATTCAGAAGGAATCCAC 9124 Score = 98.7 bits (108), Expect = 8e-16 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||| ||| | ||| || |||| || ||||| || ||||| || || ||||| ||||| Sbjct 9713 CGACACCATTGACAATGTCAAGGCGAAGATTCAGGATAAGGAAGGGATACCACCTGATCA 9772 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || ||||| || ||||| || |||||| |||||||| ||||| | || || ||||| Sbjct 9773 GCAGCGTCTGATCTTTGCTGGGAAACAGCTAGAGGATGGTCGCACTCTTTCAGACTACAA 9832 Query 22398 CATTCAAAAAGAATCCACC 22416 |||||| || ||||| ||| Sbjct 9833 CATTCAGAAGGAATCTACC 9851 >seq9516 Length=56271 Score = 120 bits (132), Expect = 3e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || || | ||||| || ||| | || ||||| ||||| | | Sbjct 47897 ATGCAGATTTTTGTCAAGACACTGACCGGAAAGACGATTACCCTTGAGGTGGAGTCTTCG 47838 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || ||||| ||||||||||| ||||| ||||| || Sbjct 47837 GACACCATTGACAACGTCAAGGCGAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAG 47778 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| ||||| || | || ||| |||||| |||| || |||||| Sbjct 47777 CAGCGTCTAATTTTTGCTGGCAAGCAACTCGAAGATGGCCGCACGCTCTCTGACTACAAC 47718 Query 22399 ATTCAAAAAGA 22409 || || ||||| Sbjct 47717 ATCCAGAAAGA 47707 Score = 91.5 bits (100), Expect = 1e-13 Identities = 112/152 (74%), Gaps = 1/152 (1%) Strand=Plus/Minus Query 22295 TCAAACAAAAA-ATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTT 22353 ||||| | ||| | |||||| || || |||| || || || ||||||||||| || ||| Sbjct 48326 TCAAAGATAAAGACTCAAGAAAATGATAGTATCCCCCCTGACCAACAACGTCTCATCTTT 48267 Query 22354 GCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCC 22413 |||||||| || | || ||| ||| || |||| ||||| ||||| ||||| || || Sbjct 48266 GCCGGCAAGCAACTTGAAGATGGCCGAACTCTCTCGGATTATAACATCCAAAAGGAGTCA 48207 Query 22414 ACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || | ||| | || ||||| | || ||||| Sbjct 48206 ACTCTTCATCTTGTCTTGCGTCTCCGTGGAGG 48175 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/155 (73%), Gaps = 1/155 (1%) Strand=Plus/Minus Query 22292 ATATCAAACA-AAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATA 22350 || ||||| | ||||| |||| | || || |||| || || |||||||||||||| || Sbjct 48053 ATGTCAAAGATAAAAACTCAATAGAACGATAGTATCCCCCCTGATCAACAACGTCTCATT 47994 Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410 |||||||||||||| | || ||| || || |||| ||||| || || ||||| || Sbjct 47993 TTTGCCGGCAAACAACTTGAAGATGGTCGAACTCTCTCGGATTATAATATCCAAAAGGAG 47934 Query 22411 TCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || | ||| | || || || | || ||||| Sbjct 47933 TCAACTCTTCATCTTGTCTTACGTCTTCGTGGAGG 47899 >seq5568 Length=9436 Score = 86.0 bits (94), Expect = 5e-12 Identities = 140/200 (70%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAA--ACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 |||||||||||||| || |||| || || || | |||| || || ||| | | Sbjct 6733 ATGCAAATTTTTGTGAAGGGACTT--ACGGGCAAGAGTATCACCCTGGAGGTGAAGTCTT 6676 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | || | | | |||||| |||| | ||||| || |||||| || ||||| ||| Sbjct 6675 CTGACATCATTGACGATGTCAAGGCGAGGATTCAGGATAAGGAGAAGATACCACCTGATT 6616 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 || ||||| || ||||| || |||||| | |||||| ||||| | || | |||| Sbjct 6615 GGCAGCGTCTGATCTTTGCTGGGAAACAGCTGGAGGATGGGCGCACTCTTTCATACTACA 6556 Query 22397 ACATTCAAAAAGAATCCACC 22416 ||||||| || ||||||||| Sbjct 6555 ACATTCAGAAGGAATCCACC 6536 >seq2300 Length=1447 Score = 86.0 bits (94), Expect = 5e-12 Identities = 140/200 (70%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAA--ACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 |||||||||||||| || |||| || || || | |||| || || ||| | | Sbjct 1133 ATGCAAATTTTTGTGAAGGGACTT--ACGGGCAAGAGTATCACCCTGGAGGTGAAGTCTT 1076 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | || | | | |||||| |||| || ||||| || ||||| || ||||| ||| Sbjct 1075 CTGACATCATTGACGATGTCAAGGCGAAGATTCAGGATAAGGAAAAGATACCACCTGATT 1016 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 || ||||| || ||||| || |||||| | |||||| ||||| | || | |||| Sbjct 1015 GGCAGCGTCTGATCTTTGCTGGGAAACAGCTGGAGGATGGGCGCACTCTTTCATACTACA 956 Query 22397 ACATTCAAAAAGAATCCACC 22416 ||||||| || ||||||||| Sbjct 955 ACATTCAGAAGGAATCCACC 936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419674850630350