Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq6550 114 1e-20 seq9516 100 3e-16 >seq6550 Length=14069 Score = 114 bits (126), Expect = 1e-20 Identities = 142/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| |||||||||||||| | ||| || || | || || || || || ||||| || Sbjct 9118 TCCTTCTGAATATTGTAATCCGACAGGGTACGACCATCTTCCAGTTGTTTTCCAGCAAAG 9059 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136 ||||| ||||||||||| | ||| | | || |||||| ||| |||| | || | | Sbjct 9058 ATGAGGCGCTGCTGGTCCGGTGGGATACCTTCTTTGTCC-TGAATTTTCGCCTTCACATT 9000 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | ||||| || ||||| || | ||||||||| |||||||| |||||||| || Sbjct 8999 GTCGATGGTGTCAGAAGACTCCACCTCCAGCGTGATGGTCTTGCCCGTAAGCGTCTTCAC 8940 Query 42197 AAAGATTTGCAT 42208 ||| |||||||| Sbjct 8939 AAAAATTTGCAT 8928 Score = 86.0 bits (94), Expect = 7e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || || || |||||||||| || || || | || || | |||||| ||||| || Sbjct 10073 CTCTTTCTGGATGTTGTAATCAGAAAGGGTGCGTCCATCCTCCAACTGCTTGCCAGCAAA 10014 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||||||||||||||| | || | || ||||| ||| || || ||||| | Sbjct 10013 AATGAGTCGCTGCTGGTCCGGAGGAATGCCTTCCTTATCCTGTATCTTCGCTTTGACATT 9954 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | |||||| ||||| || || | || || ||||| || || || || || || Sbjct 9953 ATCGATCGTGTCTGAGGATTCAACCTCAAGAGTTATCGTTTTTCCTGTCAGGGTTTTAAC 9894 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 9893 GAAGATCTGCAT 9882 >seq9516 Length=56271 Score = 100 bits (110), Expect = 3e-16 Identities = 149/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 42006 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 42065 ||||| |||||||| || || || ||||| |||| || || || | || || || ||| Sbjct 47695 TGCAACGTGCTCTCTTTCTGGATGTTGTAGTCAGAGAGCGTGCGGCCATCTTCGAGTTGC 47754 Query 42066 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTT 42125 || ||||| || || || ||||||||||||| || | || |||||||||| ||| | || Sbjct 47755 TTGCCAGCAAAAATTAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCC-TGAATCTT 47813 Query 42126 TG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCG 42183 | |||| ||| | | | ||||| || ||||| || | || || || || || | Sbjct 47814 CGCCTTGA-CGTTGTCAATGGTGTCCGAAGACTCCACCTCAAGGGTAATCGTCTTTCCGG 47872 Query 42184 TTAGCGTCTTTACAAAGATTTGCATT 42209 | || ||||| ||||| || |||||| Sbjct 47873 TCAGTGTCTTGACAAAAATCTGCATT 47898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543142250237600