Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq6550 125 7e-24 seq9516 98.7 1e-15 >seq6550 Length=14069 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 ||||| || | | ||| || || |||| || || ||||| || ||||||||||| | Sbjct 10108 CCGCCACGAAGACGAAGAACGAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGAA 10049 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | |||||| | || || | ||||||||| ||| ||||||| ||||||||||| |||||| Sbjct 10048 AGGGTGCGTCCATCCTCCAACTGCTTGCCAGCAAAAATGAGTCGCTGCTGGTCCGGAGGA 9989 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || || |||| | || ||||| ||| || | || || || || || Sbjct 9988 ATGCCTTCCTTATCCTGTA-TCTTCGCTTTGACATTATCGATCGTGTCTGAGGATTCAAC 9930 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | ||||| || || || |||| ||||| ||||| || ||||| Sbjct 9929 CTCAAGAGTTATCGTTTTTCCTGTCAGGGTTTTAACGAAGATCTGCAT 9882 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 ||||| || | | ||| || ||||| | || ||||| || ||||| |||||||| | Sbjct 9154 CCGCCACGAAGGCGAAGGACGAGATGGAGAGTGGATTCCTTCTGAATATTGTAATCCGAC 9095 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||| || | ||||| || || || || ||| | ||||| ||||||||||| || || Sbjct 9094 AGGGTACGACCATCTTCCAGTTGTTTTCCAGCAAAGATGAGGCGCTGCTGGTCCGGTGGG 9035 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || |||||||| || || ||||| ||| ||| || | || ||| | ||||| Sbjct 9034 ATACCTTCTTTGTCCTGAATTTTCGCCTTCACATTGTCGATGGTGTCAGAAGACTCCACC 8975 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| || | || || || ||||||||||| Sbjct 8974 TCCAGCGTGATGGTCTTGCCCGTAAGCGTCTTCACAAAAATTTGCAT 8928 Score = 89.7 bits (98), Expect = 5e-13 Identities = 130/184 (71%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 64260 GAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCC 64319 |||||||||| |||| | ||||| | || || ||||| || || ||| | || || | Sbjct 9339 GAATGTTGTAGTCTGAAAGAGTGCGACCATCCTCTAGCTGTTTCCCAGCAAAGATCAGAC 9280 Query 64320 GCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTG 64379 ||||||| || || || || ||||| || || || || || ||| ||| || | | Sbjct 9279 GCTGCTGATCAGGTGGTATCCCTTCCTTATCCTGAATCTTCGCCTTGACATTGTCAATGG 9220 Query 64380 TATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTT 64439 | ||| | || ||||||| || | |||||| || |||| ||||| |||||||| | Sbjct 9219 TGTCAGAAGATTCGACTTCTAGCGTGATGGTCTTCCCTGTCAGCGTTTTGACGAAAATCT 9160 Query 64440 GCAT 64443 |||| Sbjct 9159 GCAT 9156 >seq9516 Length=56271 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 ||||| || |||||||| || | || ||||| | ||||| || |||||||| ||| || Sbjct 47707 TCTTTCTGGATGTTGTAGTCAGAGAGCGTGCGGCCATCTTCGAGTTGCTTGCCAGCAAAA 47766 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 || || |||||||||||||||||||| || || || || || || || ||| || Sbjct 47767 ATTAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTG 47826 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | || || | ||||| || | || | ||||| ||||||| || || || Sbjct 47827 TCAATGGTGTCCGAAGACTCCACCTCAAGGGTAATCGTCTTTCCGGTCAGTGTCTTGACA 47886 Query 64433 AAAATTTGCATT 64444 ||||| |||||| Sbjct 47887 AAAATCTGCATT 47898 Score = 86.0 bits (94), Expect = 6e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || ||||||| || || || ||||| ||||| ||||| | || || || | |||||| Sbjct 48193 ACAAGATGAAGAGTTGACTCCTTTTGGATGTTATAATCCGAGAGAGTTCGGCCATCTTCA 48252 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 || |||||||||||| | ||||| || || ||||| || || || | || |||||||| Sbjct 48253 AGTTGCTTGCCGGCAAAGATGAGACGTTGTTGGTCAGGGGGGATACTATCATTTTCTTGA 48312 Query 64355 ATTTTTTGCTTT 64366 | ||| |||| Sbjct 48313 GTCTTTATCTTT 48324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499579908631600