Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq9516 120 3e-22 seq6550 107 2e-18 seq4003 93.3 4e-14 >seq9516 Length=56271 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 |||||| || || ||||| || | |||||| ||| || || || || ||||| | Sbjct 47706 CTCTTTCTGGATGTTGTAGTCAGAGAGCGTGCGGCCATCTTCGAGTTGCTTGCCAGCAAA 47765 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTT 127040 || | |||||||| |||||||| ||||||||||||||| || ||| ||||| ||| Sbjct 47766 AATTAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTT 47825 Query 127041 GTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 127100 | || | |||||||| | ||| || || | ||| | ||| || |||||||| || || | Sbjct 47826 G-TCAATGGTGTCCGAAGACTCCACCTCAAGGGTAATCGTCTTTCCGGTCAGTGTCTTGA 47884 Query 127101 CAAAAATCTGCAT 127113 ||||||||||||| Sbjct 47885 CAAAAATCTGCAT 47897 >seq6550 Length=14069 Score = 107 bits (118), Expect = 2e-18 Identities = 122/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 126950 GTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATG 127009 |||||| ||| ||||||||||| ||||| |||||| ||||||||||| || ||||| Sbjct 9319 GTGCGACCATCCTCTAGCTGTTTCCCAGCAAAGATCAGACGCTGCTGATCAGGTGGTATC 9260 Query 127010 CCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCG 127069 || ||||| ||| || ||| ||||| | || | |||||| | | |||||||| Sbjct 9259 CCTTCCTTATCCTGAATCTTCGCCTTGACATTGTCAATGGTGTCAGAAGATTCGACTTCT 9200 Query 127070 ACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || | || || || ||||| ||||| || ||||||||||| Sbjct 9199 AGCGTGATGGTCTTCCCTGTCAGCGTTTTGACGAAAATCTGCAT 9156 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || |||||||||||||| || || ||| ||| || || ||||||||| Sbjct 9124 GTGGATTCCTTCTGAATATTGTAATCCGACAGGGTACGACCATCTTCCAGTTGTTTTCCA 9065 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | |||||||| || || || || || || |||||| |||||| ||| Sbjct 9064 GCAAAGATGAGGCGCTGCTGGTCCGGTGGGATACCTTCTTTGTCCTGAATTTTCGCCTTC 9005 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | | ||| || || | || | || ||||| || || || Sbjct 9004 ACATTGTCGATGGTGTCAGAAGACTCCACCTCCAGCGTGATGGTCTTGCCCGTAAGCGTC 8945 Query 127097 TTTACAAAAATCTGCATG 127114 || |||||||| |||||| Sbjct 8944 TTCACAAAAATTTGCATG 8927 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||||||||| || || |||||||| | ||||| ||| || | ||| || ||| Sbjct 10078 GTAGACTCTTTCTGGATGTTGTAATCAGAAAGGGTGCGTCCATCCTCCAACTGCTTGCCA 10019 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || | || | ||||||||| || ||||| ||||| ||||| ||| || ||| ||| Sbjct 10018 GCAAAAATGAGTCGCTGCTGGTCCGGAGGAATGCCTTCCTTATCCTGTATCTTCGCTTTG 9959 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||| | || || || | || | |||||| || ||||| ||| Sbjct 9958 ACATTATCGATCGTGTCTGAGGATTCAACCTCAAGAGTTATCGTTTTTCCTGTCAGGGTT 9899 Query 127097 TTTACAAAAATCTGCATG 127114 || || || ||||||||| Sbjct 9898 TTAACGAAGATCTGCATG 9881 Score = 86.0 bits (94), Expect = 6e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||| || || ||||| ||||| || | |||||| ||| ||||||||||| ||| Sbjct 9850 GTAGATTCCTTCTGAATGTTGTAGTCTGAAAGAGTGCGACCATCCTCTAGCTGTTTCCCA 9791 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||||| ||||||||||| || ||||| || ||||| ||| || ||| |||| Sbjct 9790 GCAAAGATCAGACGCTGCTGATCAGGTGGTATCCCTTCCTTATCCTGAATCTTCGCCTTG 9731 Query 127037 AGTTGTTCGACGGTGTC 127053 | | || | |||||| Sbjct 9730 ACATTGTCAATGGTGTC 9714 >seq4003 Length=18687 Score = 93.3 bits (102), Expect = 4e-14 Identities = 120/164 (73%), Gaps = 10/164 (6%) Strand=Plus/Plus Query 47412 GGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTT 47471 |||||||| ||| | ||||| | |||||||||| ||||| ||||| || || |||||| Sbjct 14488 GGAATGAATGCGAAATTGATGTGCCAGTACATCGAGTTTGTTGCCGATCGGCTCCTCGTT 14547 Query 47472 CAGCTA-----AAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACA 47526 ||| || || ||| ||||| || | ||||| ||||| || ||| ||| Sbjct 14548 --GCTTTGGGCAACGAT---AAGGTTTACAACTCGACCAATCCTTTCGATTTCATGGACA 14602 Query 47527 ACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTC 47570 || ||||| | |||||||| ||||| ||||||||||||||| Sbjct 14603 TGATCTCGCTGCAAGGCAAGACAAACTTCTTCGAGAAGCGCGTC 14646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475439044333600